DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Ba and serpinh1

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_002937290.2 Gene:serpinh1 / 100490491 XenbaseID:XB-GENE-1005105 Length:450 Species:Xenopus tropicalis


Alignment Length:467 Identity:99/467 - (21%)
Similarity:195/467 - (41%) Gaps:53/467 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LWIPLLLGAIFLCSADPQNNQAPL--------------------QLSVGNPLTAFTAPTAFQSGV 54
            :|:..||....|...|...::.|:                    .::...|:.|...|.| :..|
 Frog     1 MWMIKLLALSILLVVDAAVDKKPVVADKKPVAVDKKPVVADKKPVVADKKPVAADKKPVA-EPPV 64

  Fly    55 SHIQSMRSNFDTDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGE 119
            ....|..:|    ||...|.|:   |.:|.|  ::..:|..::.::||..|.|.|.|:..|.:..
 Frog    65 EKKISQHAN----VLADKSAGL---AFNLYQ--TMAKDKNVENILLSPVVVASSLGLVSLGGQAS 120

  Fly   120 TRNQLKKSLRIN-VEDEKLR-GAYKVWSSFLNITTSTIEVATLQAIYTGKGYPIKNNY-RDAIQN 181
            |..|.|..|..: :.||.:. |..::.:...|.|...:.......:|........::: :::.::
 Frog   121 TAAQAKAVLSADKLSDEHIHSGLAELLNEVSNSTARNVTWKIGNRLYGPSSISFTDDFVKNSKKH 185

  Fly   182 YNVQPMEVDFYSPDSVIQ-INEDTNRTTRGLIP-YTILPQDVYGAKMFLLSSLYFKGQWKFPFNK 244
            ||.:..:::|....|.:: |||..::.|.|.:| .|...:...||  .::::::||..|...|:.
 Frog   186 YNYEHSKINFRDKRSTLRSINEWASQATDGKLPEVTSDMERTDGA--LIVNAMFFKPHWDERFHH 248

  Fly   245 TLTREEPFFSESGEVIGKIPMMVQEANFAYVSNVE-GLDGYVLELPYGTQDRLAMIVVLPKRGFK 308
            .:.....|.......: .:|||.:...:.|:.:.: ||.  :||:|. .....:|:.::|.....
 Frog   249 QMVDNRGFMVTRSFTV-SVPMMHRTGLYNYLEDEKNGLQ--ILEMPL-AHKLSSMLFIMPHHVEP 309

  Fly   309 LNDVANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENT 373
            |..|.   |.|....:...:.....:|     |.|.:||........|:..|..:|:.:..|:..
 Frog   310 LERVE---KLLTREQVKTWVGKMTKKA-----VAVSLPKVSLEVSHDLQKHLGDLGLTEAIDKTK 366

  Fly   374 ANLDRMS--SGLFAKLVVHSTKIIVDEQGTTAGAVTEAALANKATPPKFLLNRPFQYMIVEKATG 436
            |:|.::|  ..|:...:.|:..:..|..|....:...:....:| |..|.::.||.::|.::.|.
 Frog   367 ADLSKISGKKDLYLASMFHAAALEWDTDGNPFDSDIYSREELRA-PKLFYVDHPFVFLIKDEKTD 430

  Fly   437 LLLFAGQVRNPK 448
            .:||.|::..||
 Frog   431 SILFIGRLVRPK 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 81/376 (22%)
serpinh1XP_002937290.2 serpinH1_CBP1 68..449 CDD:381003 88/399 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.