DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaSnap and napbb

DIOPT Version :10

Sequence 1:NP_524180.1 Gene:alphaSnap / 40233 FlyBaseID:FBgn0250791 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001074171.2 Gene:napbb / 568195 ZFINID:ZDB-GENE-070112-2132 Length:295 Species:Danio rerio


Alignment Length:294 Identity:183/294 - (62%)
Similarity:231/294 - (78%) Gaps:4/294 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DN---EQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAGECFC 64
            ||   |::|:||||||:||:.....|||.:|||::|||:|.|.|.||.|||||:|||:.||..||
Zfish     2 DNSGKEKEAIQLMAEADKKVKSSGSFLGGMFGGNHKVEEACEMYARAANMFKMAKNWSAAGNAFC 66

  Fly    65 EAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMY 129
            :||.:|.:..::||:.|.||||.|.:||.|.:.|:.||..:|||||||||||:|||||.:|||:|
Zfish    67 QAARIHMQLQNKHDSATSYVDAGNAFKKADPQEAIKCLNAAIDIYTDMGRFTIAAKHHITIAEVY 131

  Fly   130 ESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESS 194
            ||:..::.|:|.||||||||:|||||.||||||:||||.|:||||.|:|||.|||||.::::::.
Zfish   132 ESELVDIEKAIAHYEQAADYYKGEESNSSANKCLLKVASYSAQLEQYQKAIEIYEQVGSNTMDNP 196

  Fly   195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNIEGFTE 259
            |||||||||||:|:|||..||.|||:.||.||.:.:|||.||||.||:|.|.|..||||.|.|||
Zfish   197 LLKYSAKEYFFKASLCHFIVDELNAKLAIGKYEEMFPAFSDSRECKLLKKLLEAHEEQNAEAFTE 261

  Fly   260 AVKDYDSISRLDQWYTTILLRIKKAADEDP-DLR 292
            |||::|||||||||.||:||||||....|. ||:
Zfish   262 AVKEFDSISRLDQWLTTMLLRIKKTIQGDEGDLK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaSnapNP_524180.1 SNAP 7..284 CDD:276937 176/276 (64%)
TPR repeat 35..72 CDD:276937 23/36 (64%)
TPR repeat 76..112 CDD:276937 19/35 (54%)
TPR repeat 115..152 CDD:276937 23/36 (64%)
TPR repeat 156..192 CDD:276937 24/35 (69%)
napbbNP_001074171.2 SNAP 9..287 CDD:276937 177/277 (64%)
TPR repeat 37..74 CDD:276937 23/36 (64%)
TPR repeat 78..114 CDD:276937 19/35 (54%)
TPR repeat 82..109 CDD:276809 12/26 (46%)
TPR repeat 114..151 CDD:276809 24/36 (67%)
TPR repeat 117..154 CDD:276937 23/36 (64%)
TPR repeat 156..188 CDD:276809 24/31 (77%)
TPR repeat 158..194 CDD:276937 24/35 (69%)

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