DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaSnap and napab

DIOPT Version :9

Sequence 1:NP_524180.1 Gene:alphaSnap / 40233 FlyBaseID:FBgn0250791 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_956060.1 Gene:napab / 327082 ZFINID:ZDB-GENE-030131-5290 Length:295 Species:Danio rerio


Alignment Length:294 Identity:182/294 - (61%)
Similarity:234/294 - (79%) Gaps:4/294 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DN---EQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAGECFC 64
            ||   |::|..||||||||:...:.|.|||||||:|:|||.:.|.||.|||||:|||:.||..|.
Zfish     2 DNTGKEKEATALMAEAEKKVKSSQSFFGSLFGGSSKMEDACDLYGRAANMFKMAKNWSAAGNAFS 66

  Fly    65 EAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMY 129
            :||.||.:..|:|||.|.::||.|.:||.|.:.|:|||.::|:|||||||||:|||||.:|||:|
Zfish    67 QAALLHLQMQSKHDAATNFIDAGNAFKKSDPQEAINCLNRAIEIYTDMGRFTIAAKHHVTIAEVY 131

  Fly   130 ESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESS 194
            |::..::.|:|.||||||||:|||||.||||||:||||.||||||.|.|||.||||||..:::|:
Zfish   132 ETELVDIDKAIAHYEQAADYYKGEESTSSANKCLLKVATYAAQLEQYPKAIEIYEQVATHAMDST 196

  Fly   195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNIEGFTE 259
            |||||||:|||:|||||..||:|||:.|::||.:.:|||.||||.||:|.|.:..||||::.:|:
Zfish   197 LLKYSAKDYFFKAALCHFCVDMLNAKLALQKYEEMFPAFSDSRECKLMKKLLDAFEEQNVDAYTD 261

  Fly   260 AVKDYDSISRLDQWYTTILLRIKK-AADEDPDLR 292
            |||:||:|||||||.||:|||||| ..||:..||
Zfish   262 AVKEYDTISRLDQWLTTMLLRIKKNIQDEENGLR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaSnapNP_524180.1 SNAP 7..284 CDD:276937 175/277 (63%)
SNAP 7..284 CDD:291599 175/277 (63%)
TPR repeat 35..72 CDD:276937 22/36 (61%)
TPR repeat 76..112 CDD:276937 18/35 (51%)
TPR repeat 115..152 CDD:276937 22/36 (61%)
TPR repeat 156..192 CDD:276937 26/35 (74%)
napabNP_956060.1 SNAP 9..288 CDD:291599 175/278 (63%)
SNAP 9..287 CDD:276937 175/277 (63%)
TPR repeat 37..74 CDD:276937 22/36 (61%)
TPR repeat 78..114 CDD:276937 18/35 (51%)
TPR repeat 114..151 CDD:276809 23/36 (64%)
TPR repeat 117..154 CDD:276937 22/36 (61%)
TPR repeat 156..188 CDD:276809 25/31 (81%)
TPR repeat 158..194 CDD:276937 26/35 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595428
Domainoid 1 1.000 369 1.000 Domainoid score I863
eggNOG 1 0.900 - - E1_KOG1586
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2839
Inparanoid 1 1.050 373 1.000 Inparanoid score I2071
OMA 1 1.010 - - QHG53796
OrthoDB 1 1.010 - - D1191204at2759
OrthoFinder 1 1.000 - - FOG0001605
OrthoInspector 1 1.000 - - otm24698
orthoMCL 1 0.900 - - OOG6_101315
Panther 1 1.100 - - LDO PTHR13768
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1307
SonicParanoid 1 1.000 - - X1012
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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