DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaSnap and Napb

DIOPT Version :9

Sequence 1:NP_524180.1 Gene:alphaSnap / 40233 FlyBaseID:FBgn0250791 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_062606.1 Gene:Napb / 17957 MGIID:104562 Length:298 Species:Mus musculus


Alignment Length:297 Identity:183/297 - (61%)
Similarity:233/297 - (78%) Gaps:7/297 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DN---EQKALQLMAEAEKKLTQQKGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKAGECFC 64
            ||   |::|:||||||||::.....||..||||:.::|:|.|.|.||.|||||:|||:.||..||
Mouse     2 DNAGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFC 66

  Fly    65 EAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMY 129
            :||.||.:..|:||:.|.:|||.|.|||.|.:.|:|||..:|||||||||||:|||||.:|||:|
Mouse    67 QAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIY 131

  Fly   130 ESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESS 194
            |::..::.|:|.||||:|||:|||||.||||||:||||.||||||.|:|||.|||||.|:::::.
Mouse   132 ETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNP 196

  Fly   195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNIEGFTE 259
            |||||||:|||:|||||..||.|||:.|:|||.:.:|||.||||.||:|.|.|..||||.|.:||
Mouse   197 LLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTE 261

  Fly   260 AVKDYDSISRLDQWYTTILLRIKKA----ADEDPDLR 292
            |||::|||||||||.||:||||||:    .:.|.||:
Mouse   262 AVKEFDSISRLDQWLTTMLLRIKKSIQGDGEGDGDLK 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaSnapNP_524180.1 SNAP 7..284 CDD:276937 176/276 (64%)
SNAP 7..284 CDD:291599 176/276 (64%)
TPR repeat 35..72 CDD:276937 22/36 (61%)
TPR repeat 76..112 CDD:276937 20/35 (57%)
TPR repeat 115..152 CDD:276937 21/36 (58%)
TPR repeat 156..192 CDD:276937 26/35 (74%)
NapbNP_062606.1 SNAP 9..287 CDD:276937 177/277 (64%)
TPR repeat 37..74 CDD:276937 22/36 (61%)
TPR repeat 78..114 CDD:276937 20/35 (57%)
TPR repeat 117..154 CDD:276937 21/36 (58%)
TPR repeat 158..194 CDD:276937 26/35 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849669
Domainoid 1 1.000 376 1.000 Domainoid score I859
eggNOG 1 0.900 - - E1_KOG1586
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 379 1.000 Inparanoid score I2048
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53796
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001605
OrthoInspector 1 1.000 - - otm44336
orthoMCL 1 0.900 - - OOG6_101315
Panther 1 1.100 - - O PTHR13768
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1307
SonicParanoid 1 1.000 - - X1012
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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