DRSC/TRiP Functional Genomics Resources

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Protein Alignment polo and CDC5

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_013714.1 Gene:CDC5 / 855013 SGDID:S000004603 Length:705 Species:Saccharomyces cerevisiae


Alignment Length:633 Identity:194/633 - (30%)
Similarity:318/633 - (50%) Gaps:101/633 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQKEKTAQEITIHRSLNHPNIVK 87
            |.|.|..|.|:||||:|::|.| ::.::||.|.|:|..:.....::|...||.||:|::|||||:
Yeast    80 KDYHRGHFLGEGGFARCFQIKD-DSGEIFAAKTVAKASIKSEKTRKKLLSEIQIHKSMSHPNIVQ 143

  Fly    88 FHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFECRYYIYQIIQGVKYLHDNRIIHRDLKLG 152
            |.:.|||..|:||:||:|...|:|||.||||.:||.|.|::..||...:||:|..|:||||||||
Yeast   144 FIDCFEDDSNVYILLEICPNGSLMELLKRRKVLTEPEVRFFTTQICGAIKYMHSRRVIHRDLKLG 208

  Fly   153 NLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILTKK--GHSFEVDIWSIGCVMYT 215
            |:|.:...::||||||||..:..|.|||.|:||||||||||:|..|  ||||||||||:|.::|.
Yeast   209 NIFFDSNYNLKIGDFGLAAVLANESERKYTICGTPNYIAPEVLMGKHSGHSFEVDIWSLGVMLYA 273

  Fly   216 LLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAAD----MVIAMLQPNPESRPAIGQLLNFEF 276
            ||:|:|||:.:.:...|.:||..::..|.  .||.:|    ::..:|..:|..||::.:::::.:
Yeast   274 LLIGKPPFQARDVNTIYERIKCRDFSFPR--DKPISDEGKILIRDILSLDPIERPSLTEIMDYVW 336

  Fly   277 LKGSKVPMFLPSSCLTMAPRI------------------------------------------GS 299
            .:|: .|..:||:.::.||..                                          .|
Yeast   337 FRGT-FPPSIPSTVMSEAPNFEDIPEEQSLVNFKDCMEKSLLLESMSSDKIQRQKRDYISSIKSS 400

  Fly   300 NDTIEDSMHRKPLMEMNGIRPDDT--------------RLESTFLKANLHDA---------ITAS 341
            .|.:|:....:|.:. :.:.|..|              ||.....:|.:..|         |..|
Yeast   401 IDKLEEYHQNRPFLP-HSLSPGGTKQKYKEVVDIEAQRRLNDLAREARIRRAQQAVLRKELIATS 464

  Fly   342 AQVCRHSEDYRSDIESLYQQLTNLINGKPRILQGNLGDENTDPAAQPLFWISKWVDYSDKYGFGY 406
            ..|.:.....|......:..|..::..:.:...|.|..........|:. ::||||||:|:||.|
Yeast   465 TNVIKSEISLRILASECHLTLNGIVEAEAQYKMGGLPKSRLPKIKHPMI-VTKWVDYSNKHGFSY 528

  Fly   407 QLCDEGIGVMFNDTTKLILLPNQINVHFIDKDGKETYMTT----TDYCKSLDKKMKLLSYFKRYM 467
            ||..|.|||:||:.|.::.|.:.....:|..|.:|.::.:    ::..:.|.:.::::.:|.:||
Yeast   529 QLSTEDIGVLFNNGTTVLRLADAEEFWYISYDDREGWVASHYLLSEKPRELSRHLEVVDFFAKYM 593

  Fly   468 IEHLVKAGANNVN------IESDQISRMPHLHSWFRTTCAVVMHLTNGSVQLNFSDHMKLILCPR 526
                 ||..:.|:      ...|.:    .|..:.|....|:..|::|:.|.||.||.|:.:...
Yeast   594 -----KANLSRVSTFGREEYHKDDV----FLRRYTRYKPFVMFELSDGTFQFNFKDHHKMAISDG 649

  Fly   527 MSAITYMDQEKNFRTYRFSTIVENG-----VSKDLYQKIRYAQEKLRK 569
            ...:||:.......||....:::.|     ...:..:|:...:|.|::
Yeast   650 GKLVTYISPSHESTTYPLVEVLKYGEIPGYPESNFREKLTLIKEGLKQ 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 120/259 (46%)
POLO_box_1 388..475 CDD:240561 29/90 (32%)
POLO_box_2 490..570 CDD:240560 19/85 (22%)
CDC5NP_013714.1 STKc_PLK 80..337 CDD:271001 120/259 (46%)
POLO_box_1 510..601 CDD:240561 30/96 (31%)
POLO_box_2 613..698 CDD:240560 19/89 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346576
Domainoid 1 1.000 243 1.000 Domainoid score I369
eggNOG 1 0.900 - - E1_KOG0575
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3690
Inparanoid 1 1.050 293 1.000 Inparanoid score I520
Isobase 1 0.950 - 0 Normalized mean entropy S1212
OMA 1 1.010 - - QHG54080
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 1 1.000 - - oto99483
orthoMCL 1 0.900 - - OOG6_100759
Panther 1 1.100 - - LDO PTHR24345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R930
SonicParanoid 1 1.000 - - X638
TreeFam 1 0.960 - -
1615.740

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