DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polo and Plk3

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_071523.1 Gene:Plk3 / 58936 RGDID:62039 Length:647 Species:Rattus norvegicus


Alignment Length:607 Identity:236/607 - (38%)
Similarity:343/607 - (56%) Gaps:62/607 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PD--RLV-DINQRKTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQKEKTAQEI 74
            ||  ||: |....:||.:.|..||||||:|||..|.||...:|.|::.:..:.|.:|:||...||
  Rat    47 PDASRLITDPRSGRTYIKGRLLGKGGFARCYEATDTETSIAYAVKVIPQSRVAKPHQREKIINEI 111

  Fly    75 TIHRSLNHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFECRYYIYQIIQGVKYL 139
            .:||.|.|.:||:|.::|||:.||||.||||.::|:..:.|.|.::.|.|.|||:.||:.|:|||
  Rat   112 ELHRDLQHRHIVRFSHHFEDADNIYIFLELCSRKSLAHIWKARHTLLEPEVRYYLRQILSGLKYL 176

  Fly   140 HDNRIIHRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILTKKGHSFEV 204
            |...|:||||||||.|:.|.:.:|:||||||.|:|...:||||:||||||:|||:|.::||..|.
  Rat   177 HQRGILHRDLKLGNFFITDNMELKVGDFGLAARLEPPEQRKKTICGTPNYVAPEVLLRQGHGPEA 241

  Fly   205 DIWSIGCVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMVIAMLQPNPESRPAIG 269
            |:||:||||||||.|.|||||..||:||..||:..|.:|:.|..||..::.|:|:.:|..||:|.
  Rat   242 DVWSLGCVMYTLLCGSPPFETADLKETYRCIKQVHYTLPASLSLPARQLLAAILRASPRDRPSIE 306

  Fly   270 QLLNFEFLKGSKVPMFLP-SSCLTMAPRIGSNDTIEDSMHRKPLMEMNGIRPDDTR--------- 324
            |:|..:|......|..|| |||:|:......|..  .|:..|....:.|.|....:         
  Rat   307 QILRHDFFTKGYTPDRLPVSSCVTVPDLTPPNPA--RSLFAKVTKSLFGRRKSKNKNHSEEQDNV 369

  Fly   325 --LESTFLKANL-H-----DAITASA-----QVCRHSED-------------------YRSDIES 357
              |.|..::.:: |     :|..|||     .|...:||                   ..:.:||
  Rat   370 SCLVSGLMRTSIGHPDVRPEAPAASALAPVSLVETAAEDSSPRGTLASSGDGFEEGLTVTTVVES 434

  Fly   358 LYQQLTNLINGKPRILQGNLGDENTDPAAQ--PLFWISKWVDYSDKYGFGYQLCDEGIGVMFNDT 420
            ....|.|.:...|.      .::|..|.||  ||.|:|||||||:|:||||||....:.|:|||.
  Rat   435 ALCALRNCVAFMPP------AEQNPAPLAQPEPLVWVSKWVDYSNKFGFGYQLSSRRVAVLFNDG 493

  Fly   421 TKLILLPNQINVHFIDKDGKETYMTTTDYCKSLDKKMKLLSYFKRYMIEHLVKAGANNVNIESDQ 485
            |.:.|..|:..||:.....|....:.....::|..::.:|.||..||.:||:| |.:..::|..:
  Rat   494 THMALSANRKTVHYNPTSTKHFSFSVGSVPRALQPQLGILRYFASYMEQHLMK-GGDLPSVEEVE 557

  Fly   486 ISRMPHLHSWFRTTCAVVMHLTNGSVQLNF-SDHMKLILC---PRMSAITYMDQEKNFRTYRFST 546
            :...|.|..|.:|..|::|..::|:||:|| .||.||||.   |.:  :|::.:.::..||..|.
  Rat   558 VPAPPLLLQWVKTDQALLMLFSDGTVQVNFYGDHTKLILSGWEPLL--VTFVARNRSACTYLASH 620

  Fly   547 IVENGVSKDLYQKIRYAQEKLR 568
            :.:.|.|.||.|::|||...||
  Rat   621 LRQLGCSPDLRQRLRYALRLLR 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 129/253 (51%)
POLO_box_1 388..475 CDD:240561 36/86 (42%)
POLO_box_2 490..570 CDD:240560 32/83 (39%)
Plk3NP_071523.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 4/8 (50%)
STKc_PLK3 60..314 CDD:271091 129/253 (51%)
S_TKc 62..314 CDD:214567 128/251 (51%)
POLO_box_1 461..549 CDD:240561 37/88 (42%)
POLO_box_2 562..629 CDD:240560 24/68 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0575
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373288at33208
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100759
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X638
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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