DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polo and plk3

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001006766.1 Gene:plk3 / 448451 XenbaseID:XB-GENE-5860546 Length:661 Species:Xenopus tropicalis


Alignment Length:630 Identity:229/630 - (36%)
Similarity:351/630 - (55%) Gaps:67/630 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KPE-DKSTDIPDRLV-DINQRKTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQ 66
            ||| .:|...|.:|: |....|.|.:.|..||||||:|||:.:|.|:..:|.|::....:.|.:|
 Frog    37 KPEPQRSPQQPCKLITDPLTGKAYTKGRLLGKGGFARCYEMTEVATNKTYAVKVIPHSRVAKPHQ 101

  Fly    67 KEKTAQEITIHRSLNHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFECRYYIYQ 131
            :||...||.:||.|:|.::|||.::||||:||||.||:|.::|:..:.|.|.::.|.|.||::.|
 Frog   102 REKIVNEIDLHRELHHKHVVKFSHHFEDSENIYIFLEICSRKSLAHIWKARHTLLEPEVRYFLKQ 166

  Fly   132 IIQGVKYLHDNRIIHRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILT 196
            ||.|:||||...|:||||||||.|:|:.:.:|:||||||.|:|...:||||:||||||:|||:|.
 Frog   167 IISGLKYLHLKGILHRDLKLGNFFINESMELKVGDFGLAARLEPPEQRKKTICGTPNYLAPEVLY 231

  Fly   197 KKGHSFEVDIWSIGCVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMVIAMLQPN 261
            ::||..|.||||:||||||||.|.|||||..||:||..||:.:|.:|:.|...|..:::.:|:..
 Frog   232 RQGHGPESDIWSLGCVMYTLLCGTPPFETSDLKETYRCIKQVKYTLPACLSSAAKHLLMGILKRT 296

  Fly   262 PESRPAIGQLLNFEFLKGSKVPMFLPSSCLTMAPRIGSNDTIEDSMHRKPLMEMNGIRPDDTRLE 326
            |..|..:.|:|..||......|..||.|...|.|.:...:..: |:..|....:.|.....|:..
 Frog   297 PGERLTLDQILEHEFFTKGYTPDKLPPSSCVMVPDLHPPNPAK-SLFTKVAKSLFGKTKSKTKKS 360

  Fly   327 STFLKANLHDAIT--ASAQVCR-----------------HSEDYRSDIESLYQQLTNLINGK--P 370
            .|..|.::...:|  ....:||                 |:....|   |....||...:||  .
 Frog   361 PTEEKDDISKIVTGLVKTSICRQLSYKTVDGNEVAPVTSHAVSANS---SPVDTLTEEASGKSVS 422

  Fly   371 RILQGNL---------------------------------GDENTDPAAQP--LFWISKWVDYSD 400
            |.::|:|                                 .:.|....|:|  ..|:|||||||:
 Frog   423 RSIRGSLVSSSDAFEDCVTASGVIETALAVLKDSLSSMPAVEGNPTSLAKPEHFVWVSKWVDYSN 487

  Fly   401 KYGFGYQLCDEGIGVMFNDTTKLILLPNQINVHFIDKDGKETYMTTTDYCKSLDKKMKLLSYFKR 465
            ||||||||.:..|||:||..|.::|..::.:||:...:.:.....|:...:.|..:|.:|.||..
 Frog   488 KYGFGYQLSNRSIGVLFNSGTHMVLPAHRRHVHYNLTNSRHFVFPTSAVPEQLQGQMSILQYFAT 552

  Fly   466 YMIEHLVKAGANNVNIESDQISRMPHLHSWFRTTCAVVMHLTNGSVQLNF-SDHMKLILCPRMSA 529
            ||.::|:|.|....:.|..|...:  |..|.:|..|::|..:||::|:|| :||.|:|||....|
 Frog   553 YMEKNLMKGGDLPCHEEGSQTPLL--LLQWVKTEHALLMLFSNGTLQVNFYNDHTKIILCKPQDA 615

  Fly   530 --ITYMDQEKNFRTYRFSTIVENGVSKDLYQKIRYAQEKLRKMLE 572
              :||:::::|.:|:..:|:.:.|.|.::|.::||..:.|::..|
 Frog   616 YLLTYINRDRNSQTFLLNTLTQTGCSSEMYHRLRYTVKLLQQKAE 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 126/253 (50%)
POLO_box_1 388..475 CDD:240561 36/88 (41%)
POLO_box_2 490..570 CDD:240560 28/82 (34%)
plk3NP_001006766.1 STKc_PLK3 58..312 CDD:271091 126/253 (50%)
POLO_box_1 477..563 CDD:240561 35/85 (41%)
POLO_box_2 577..658 CDD:240560 28/80 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373288at33208
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R930
SonicParanoid 1 1.000 - - X638
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.