DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polo and plk4

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_005158928.1 Gene:plk4 / 368390 ZFINID:ZDB-GENE-030619-14 Length:963 Species:Danio rerio


Alignment Length:448 Identity:137/448 - (30%)
Similarity:236/448 - (52%) Gaps:46/448 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DRLVD--INQR-KTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQKEKTAQEIT 75
            ||:::  ::.| :.:|.:...|||.||..|....|.|....|.|::.||.|.|....::...|:.
Zfish    20 DRILEPSVDLRIEDFKVLTLLGKGSFACVYRAKSVNTGLEVAIKMIDKKAMHKAGMVQRVINEVE 84

  Fly    76 IHRSLNHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKS-ITEFECRYYIYQIIQGVKYL 139
            |...|.||::::.:||||||..:|:|||:|....|....|.||: .||.|.|::::||::|:.||
Zfish    85 IQCRLKHPSVLELYNYFEDSNYVYLVLEMCHNGEMSRYLKERKNPFTEEEARHFMHQIVKGMLYL 149

  Fly   140 HDNRIIHRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILTKKGHSFEV 204
            |.:.|:||||.|.||.|...:::||.||||||:::...|:..|:|||||||:||:.|:..|..|.
Zfish   150 HTHGIMHRDLTLTNLLLTTSMNIKIADFGLATQLKLPSEKHFTMCGTPNYISPEVATRSAHGLES 214

  Fly   205 DIWSIGCVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMVIAMLQPNPESRPAIG 269
            |:||:||:.|..|.|:|||:|.|:|.|.:|:...||::|.::...|.|::..:||.||..||::.
Zfish   215 DVWSLGCMFYAFLTGRPPFDTDTVKRTLNKVVLGEYQMPMHISAEAQDLIQQLLQKNPALRPSLS 279

  Fly   270 QLLNFEFL----------KGSKVPMFLPSSCLTMAPRIGSNDTIEDSMHRKPLMEMNGIRPDDTR 324
            .:|:..|:          .||.....:.|...|::....:.:....|..::...:|.| :|..:|
Zfish   280 AVLDHPFMTQSGPTASKDSGSSDGGSIDSGIATISTASNATNNSSSSRLQRRTRQMIG-QPLPSR 343

  Fly   325 LESTFLKANLHDAITASAQVCRHSEDYRSDIESLYQQLTNLINGKPRILQGNLGDENTDPAAQPL 389
            :..  :.::.|.:.::|   .:..:|::.:.:....::     |..||   .:|.::..|.::.|
Zfish   344 MAP--IPSHSHHSTSSS---FKSGQDWQPNSQDDLSRM-----GVGRI---PVGADSGRPHSRYL 395

  Fly   390 FWISKWVDYSDKYGFGY---------QLCD-----EGIGVMFNDTTKLILLPNQINVH 433
                :....||:...||         :.|.     .|.|.:|..|:.....|:..:.|
Zfish   396 ----RRAHSSDRSAVGYSHNPQEAELERCHSEEMLSGAGRLFPQTSGYRNAPHGYSKH 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 104/254 (41%)
POLO_box_1 388..475 CDD:240561 12/60 (20%)
POLO_box_2 490..570 CDD:240560
plk4XP_005158928.1 STKc_PLK4 32..287 CDD:271088 104/254 (41%)
S_TKc 34..287 CDD:214567 104/252 (41%)
POLO_box_Plk4_1 588..698 CDD:240557
POLO_box_Plk4_2 699..808 CDD:240558
POLO_box_Plk4_3 878..957 CDD:240559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0575
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D507604at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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