DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polo and Plk5

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_006240983.1 Gene:Plk5 / 314627 RGDID:1305038 Length:614 Species:Rattus norvegicus


Alignment Length:618 Identity:189/618 - (30%)
Similarity:288/618 - (46%) Gaps:84/618 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVDINQRKTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQKEKTAQEITIHRSL 80
            |.|....:.|:|.:..|||.|::||::.|:.|..|||.|:|.:....:...:.|..:||.:|..|
  Rat    18 LRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAGRLRLRGKVEREIALHSRL 82

  Fly    81 NHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFECRYYIYQIIQGVKYLHDNRII 145
            :|.|||.||.:|.|..::|:|||.|.::|:..:.|.|:::||.|.|||...::.|::|||..||:
  Rat    83 HHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVRYYFRGLVSGLRYLHQQRIV 147

  Fly   146 HRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILTKKGHSFEVDIWSIG 210
            |||||..|.|||..:.|||||.|||.|:...|...:.||||||:.|||::::.|||.:.|||::|
  Rat   148 HRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQAPEVVSRNGHSAKSDIWALG 212

  Fly   211 CVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMVIAMLQPNPESRPAIGQLLNFE 275
            |:|||:|.|.|||....|.:.|..|:...|..|:.|...|..::..:|.|:|:.||::..||..:
  Rat   213 CIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLIARLLAPDPDERPSLDHLLQDD 277

  Fly   276 FLKGSKVPMFL-PSSC-----LTMAPRIGSNDTIEDSMHRK-------------PLMEMNGIRPD 321
            |......|..| |.||     ....|.:|       .:.||             |........|.
  Rat   278 FFSQGFTPERLPPHSCHSPPVFAFPPPLG-------RLFRKVGQLLLTQCRPPCPFTSKEASGPG 335

  Fly   322 DTRLESTFLKANLHDAITASAQVCRHSEDYRSDIESLYQQLTNLINGKPRI-LQ----------- 374
            :...|...::|:..:    .|.:|..|   |..:.:|....|:..:.|..: ||           
  Rat   336 EESTEPDHMEASNEE----GAPLCTES---RIHLLTLGTPRTDPADAKGTLALQLEVATRKLCLC 393

  Fly   375 ---GNLGDENT------------DPAAQ-------PLFWISKWVDYSDKYGFGYQLCDEGIGVMF 417
               |.:|...|            .||.|       .:.|..||||||.||||||||.|.|.||:|
  Rat   394 LDAGPVGRTATPKCRTEAAWRGPKPAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQLSDGGSGVLF 458

  Fly   418 NDTTKLILLPNQINVHFIDKDGKETYMTTTDYCKSLDKKMKLLSYFKRYMIEHLVKAGANNVNIE 482
            .|.:.:.|.|...:|.:....|........|....|..|:.:|..|..||...|.:.|       
  Rat   459 RDGSHMALRPPGGHVSYQPDQGTLWIFALRDVPGPLRAKLAVLRLFACYMQRRLREEG------- 516

  Fly   483 SDQISRMPH-----LHSWFRTTCAVVMHLTNGSVQLNF-SDHMKLILCPRMSAITYMDQEKN--- 538
            :..::..|.     |.|:.....|:.|..:||:||::. :..::|:|...........||..   
  Rat   517 TAPMTATPASPDFCLLSFTADAQALAMLFSNGTVQVSSKTSPVQLVLSGEGEDFLLTIQEPGGPS 581

  Fly   539 -FRTYRFSTIVENGVSKDLYQKIRYAQEKLRKM 570
             ..:|....:..:|:|..:...:|.....|:.:
  Rat   582 MGTSYTLDVLRSHGISLAVRHHLRLGLHLLQSV 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 106/253 (42%)
POLO_box_1 388..475 CDD:240561 33/86 (38%)
POLO_box_2 490..570 CDD:240560 18/89 (20%)
Plk5XP_006240983.1 STKc_PLK 25..279 CDD:271001 106/253 (42%)
S_TKc 27..279 CDD:214567 106/251 (42%)
POLO_box_1 429..516 CDD:240561 33/86 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0575
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373288at33208
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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