DRSC/TRiP Functional Genomics Resources

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Protein Alignment polo and plk-1

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001021173.1 Gene:plk-1 / 176143 WormBaseID:WBGene00004042 Length:648 Species:Caenorhabditis elegans


Alignment Length:607 Identity:270/607 - (44%)
Similarity:379/607 - (62%) Gaps:57/607 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKPEDKST--------DIPDRLVDINQRKTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKK 59
            |||..||.        ::|..:.|.::...|::.||.||||||.|||:.:..|.:|.|||:|.|.
 Worm     8 AKPPQKSNQRKEKAPPEVPALIADKDRGTYYEKGRFLGKGGFAHCYELTNRATREVVAGKVVPKS 72

  Fly    60 LMIKHNQKEKTAQEITIHRSLNHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFE 124
            :::|..|::|..||:.|||.|.|.||||..|:|||:.|:||.||||.:||:||||||||::||.|
 Worm    73 MLVKQYQRDKMTQEVQIHRELGHINIVKLFNFFEDNLNVYITLELCARRSLMELHKRRKAVTEPE 137

  Fly   125 CRYYIYQIIQGVKYLHDNRIIHRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNY 189
            .||:.:||:.||.||||..|||||:|||||||||.|.||||||||||.:..: ||||||||||||
 Worm   138 ARYFTHQIVDGVLYLHDLNIIHRDMKLGNLFLNDDLVVKIGDFGLATTVNGD-ERKKTLCGTPNY 201

  Fly   190 IAPEILTKKGHSFEVDIWSIGCVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMV 254
            ||||:|.|.|||||||||::||::|.||.||||||:|:|::|||:|:...|.:||...:|||.::
 Worm   202 IAPEVLNKAGHSFEVDIWAVGCILYILLFGQPPFESKSLEETYSRIRHNNYTIPSIATQPAASLI 266

  Fly   255 IAMLQPNPESRPAIGQLLNFEFLKGSKVPMFLPSSCLTMAPRIGSNDT--IE--------DSMHR 309
            ..||.|.|..||...|:....|.|...:|..||.|||||.|:.|.::|  :|        |:..:
 Worm   267 RKMLDPEPTRRPTAKQVQRDGFFKSGFMPTRLPVSCLTMVPKFGGHETSMMEENVAPRGVDARSQ 331

  Fly   310 KPLMEMNGI---------------RPDDTRLESTFLKANLHDAITASAQVCRHSEDYRSDIESLY 359
            :||....|:               |......|:||                |..||  :.:..|:
 Worm   332 RPLNGRAGLSALPQHIVSNNADRERAQQQAAEATF----------------REPED--AYLSQLF 378

  Fly   360 QQLTNLINGK-PRILQGNLG-DENTDPAAQPLFWISKWVDYSDKYGFGYQLCDEGIGVMFNDTTK 422
            .|:..|:..: |.:.:.... |....|...|:||||||||||||||.||||||..:||:|||.::
 Worm   379 HQVAVLLEQRIPGLEEEEAALDGYQSPECLPVFWISKWVDYSDKYGIGYQLCDNSVGVLFNDNSR 443

  Fly   423 LILLPNQINVHFIDKDGKETY--MTTTDYCKSLDKKMKLLSYFKRYMIEHLVKAGANNVNIESDQ 485
            ::|......:.:|:|..||.|  |.:.:....|:||:.||.||:.||.:||||||..:.....|.
 Worm   444 IMLDQAGNELTYIEKSNKEHYFSMHSGEMPGLLNKKVTLLKYFRSYMNDHLVKAGEGSEQRAGDD 508

  Fly   486 ISRMPHLHSWFRTTCAVVMHLTNGSVQLN-FSDHMKLILCPRMSAITYMDQEKNFRTYRFSTIVE 549
            ::|:|.|..||||..|:|:||:||:||:| |:||:|:::||.|.|:|::||.|...||:.:.:..
 Worm   509 LARLPTLRVWFRTKSAIVLHLSNGTVQINFFNDHVKMMMCPLMQAVTFIDQNKRMLTYKLNNLQR 573

  Fly   550 NGVSKDLYQKIRYAQEKLRKML 571
            ||..:....:::||:..:.:::
 Worm   574 NGCPEKFLHRLKYAKTMIERLM 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 149/253 (59%)
POLO_box_1 388..475 CDD:240561 46/88 (52%)
POLO_box_2 490..570 CDD:240560 33/80 (41%)
plk-1NP_001021173.1 STKc_PLK 36..289 CDD:271001 149/253 (59%)
S_TKc 38..289 CDD:214567 149/251 (59%)
POLO_box_1 409..499 CDD:240561 47/89 (53%)
POLO_box_2 513..594 CDD:240560 33/80 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 315 1.000 Domainoid score I691
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3690
Inparanoid 1 1.050 526 1.000 Inparanoid score I671
Isobase 1 0.950 - 0 Normalized mean entropy S1212
OMA 1 1.010 - - QHG54080
OrthoDB 1 1.010 - - D373288at33208
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 1 1.000 - - otm14095
orthoMCL 1 0.900 - - OOG6_100759
Panther 1 1.100 - - O PTHR24345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R930
SonicParanoid 1 1.000 - - X638
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.960

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