DRSC/TRiP Functional Genomics Resources

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Protein Alignment polo and plk2

DIOPT Version :9

Sequence 1:NP_001014592.1 Gene:polo / 40232 FlyBaseID:FBgn0003124 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001096545.1 Gene:plk2 / 100125189 XenbaseID:XB-GENE-1006205 Length:663 Species:Xenopus tropicalis


Alignment Length:628 Identity:216/628 - (34%)
Similarity:350/628 - (55%) Gaps:76/628 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 STDIPDRLVDINQRKTYKRMRFFGKGGFAKCYEIIDVETDDVFAGKIVSKKLMIKHNQKEKTAQE 73
            :|::...:.|....:.|.|.:..||||||||||:.|:.|:.::|.||:....:.|.:|:||..:|
 Frog    47 ATEVSRIITDPGTGRRYCRGKVLGKGGFAKCYEMTDLTTNKIYAAKIIPHSRVSKPHQREKIDKE 111

  Fly    74 ITIHRSLNHPNIVKFHNYFEDSQNIYIVLELCKKRSMMELHKRRKSITEFECRYYIYQIIQGVKY 138
            |.:||:|||.::|:|::||||.:||||:||.|.:|||..:.|.||.:|:.|.|||:.||:.|:||
 Frog   112 IELHRTLNHRHVVQFYHYFEDKENIYILLEYCSRRSMAHILKTRKVLTDPEVRYYLKQIVSGLKY 176

  Fly   139 LHDNRIIHRDLKLGNLFLNDLLHVKIGDFGLATRIEYEGERKKTLCGTPNYIAPEILTKKGHSFE 203
            ||...|:||||||||.|:|:.:.:|:||||||.|:|...:|::|:||||||::||:|.|:||..|
 Frog   177 LHAQEILHRDLKLGNFFINENMELKVGDFGLAARLEPLEQRRRTICGTPNYLSPEVLNKQGHGCE 241

  Fly   204 VDIWSIGCVMYTLLVGQPPFETKTLKDTYSKIKKCEYRVPSYLRKPAADMVIAMLQPNPESRPAI 268
            .|||::||||||:|:|:|||||..||:||..|::..|.:||.|...|..::.:||..|||.||.:
 Frog   242 SDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYSLPSSLMTSAKHLIASMLSRNPEDRPNL 306

  Fly   269 GQLLNFEFLKGSKVPMFLPSSCLTMAPRIGSNDTIEDSMHR-------------KPLMEMNGIRP 320
            .::...:|......|..||.||...||....:...::...:             |.|...|.:..
 Frog   307 DEITQHDFFTQGFTPERLPPSCCHTAPDFHLSSPAKNFFKKAAAALFGGKKEKSKYLDNHNKLPK 371

  Fly   321 DDTR-------LESTFLKANLHDAITASAQVCRHSEDY-----------RSDIESLYQQLTNLIN 367
            :|..       |:.:.:...||:.        |..|:.           ::|.:.:...:..::.
 Frog   372 EDEEIYKLRQDLQKSSISHQLHNP--------RTDEEIKTISKLDVLAEKADKQQMGDTIRMIVR 428

  Fly   368 GK-----------------------PRILQG---NLGDENTDPAAQ---PLFWISKWVDYSDKYG 403
            |.                       .|:|:|   |:.|.:..|..|   ...|::||||||:|||
 Frog   429 GTLGSCSSSSECLEDSTMGTVADTVARVLRGCLENMPDADAIPKEQIDTSFHWVTKWVDYSNKYG 493

  Fly   404 FGYQLCDEGIGVMFNDTTKLILLPNQINVHFIDKDGKETYMTTTDYCKSLDKKMKLLSYFKRYMI 468
            |||||.|..:||:||:...:.|||::..||:..:.|..:....|:..:....::.:|.||..||.
 Frog   494 FGYQLSDHTVGVLFNNGAHMNLLPDKKTVHYYAELGPCSVFPATEAPEQFISQVTVLKYFSHYME 558

  Fly   469 EHLVKAGANNVNIESDQISRMPHLHSWFRTTCAVVMHLTNGSVQLNF-SDHMKLILCPRMS--AI 530
            |:|:..|  ::...:|......:|..|.::..|::|...:|:.|:|| .||.|:|:..:..  .:
 Frog   559 ENLMDGG--DLPSVTDVCRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIIANQNDEYLL 621

  Fly   531 TYMDQEKNFRTYRFSTIVENGVSKDLYQKIRYAQEKLRKMLEK 573
            ||:::::...|:|.:|::.:|.|.||..::.||   |..:|::
 Frog   622 TYINEDRMSTTFRLNTLLISGGSSDLKNRMEYA---LNMLLQR 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
poloNP_001014592.1 STKc_PLK 23..277 CDD:271001 127/253 (50%)
POLO_box_1 388..475 CDD:240561 34/86 (40%)
POLO_box_2 490..570 CDD:240560 24/82 (29%)
plk2NP_001096545.1 STKc_PLK2 61..315 CDD:271090 127/253 (50%)
POLO_box_1 480..566 CDD:240561 35/87 (40%)
POLO_box_2 579..660 CDD:240560 24/83 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373288at33208
OrthoFinder 1 1.000 - - FOG0000754
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R930
SonicParanoid 1 1.000 - - X638
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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