DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO4 and AT3G12760

DIOPT Version :10

Sequence 1:NP_649204.2 Gene:SCCRO4 / 40231 FlyBaseID:FBgn0036967 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_566436.1 Gene:AT3G12760 / 820458 AraportID:AT3G12760 Length:250 Species:Arabidopsis thaliana


Alignment Length:208 Identity:81/208 - (38%)
Similarity:116/208 - (55%) Gaps:10/208 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YTSIPTQQSSRRHIRLEDGFSQKRCMAWFQEYTTPDEPETLGPDGMEKFCEDIGVEPENIVMLVL 92
            :.|.|..:|:...:|        |....:..|..|.....|. :|:...|.|:.|||::||.|||
plant    44 FYSQPQPRSNAAEVR--------RLEELYNRYKDPYSDMILA-EGISVLCNDLEVEPQDIVTLVL 99

  Fly    93 AYKMGATQMGFFSQQEWLKGLTELDCDSAAKMVVKLDYLRSILNDPNSFKSIYRYAYDFAKDSDQ 157
            ::.|.|.....||:||::.||..|..||..|:..||.::||.|.|...|..||.:|:.:||:..|
plant   100 SWHMNAATACEFSRQEFISGLQALGVDSIGKLQEKLPFMRSELKDEQKFHEIYNFAFGWAKEKGQ 164

  Fly   158 RCMDILTAKAMLQLLLG-KHWPLYPQFAQFLEQSKYKAINKDQWCNILEFSRTISIDLSNYDIDG 221
            :.:.:.||..|.|||.. :.|||...:..||:....|||:||.|..:|||||.:...|||||.:|
plant   165 KSLALDTAIGMWQLLFAEREWPLVTHWCDFLQDRHNKAISKDTWAQLLEFSRMVDPVLSNYDAEG 229

  Fly   222 AWPVMLDEFVEWL 234
            |||.::|||||:|
plant   230 AWPYLIDEFVEYL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO4NP_649204.2 Cullin_binding 123..233 CDD:460971 49/110 (45%)
AT3G12760NP_566436.1 UBA_DCNL 7..48 CDD:270535 1/3 (33%)
Cullin_binding 130..241 CDD:460971 49/110 (45%)

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