DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO4 and Dcun1d2

DIOPT Version :10

Sequence 1:NP_649204.2 Gene:SCCRO4 / 40231 FlyBaseID:FBgn0036967 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001128270.1 Gene:Dcun1d2 / 688913 RGDID:1582994 Length:259 Species:Rattus norvegicus


Alignment Length:193 Identity:66/193 - (34%)
Similarity:114/193 - (59%) Gaps:0/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LEDGFSQKRCMAWFQEYTTPDEPETLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQMGFFSQQ 107
            ::....||:....:..|..|.:...:|.||:::||:|:.::|.:|.:||:|::..|.....||::
  Rat    56 MKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWRFRAATQCEFSKK 120

  Fly   108 EWLKGLTELDCDSAAKMVVKLDYLRSILNDPNSFKSIYRYAYDFAKDSDQRCMDILTAKAMLQLL 172
            |::.|:|||.|||..::...|..|...|.|...||..|::.:.|||:..|:.:|:..|.|..:|:
  Rat   121 EFVDGMTELGCDSTERLKALLPKLEQELKDSAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLV 185

  Fly   173 LGKHWPLYPQFAQFLEQSKYKAINKDQWCNILEFSRTISIDLSNYDIDGAWPVMLDEFVEWLR 235
            |...:.....:..||.:...::|.:|.|..:|:|...|:.||||||.:|||||::|:|||:.|
  Rat   186 LSGRFKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEYAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO4NP_649204.2 Cullin_binding 123..233 CDD:460971 38/109 (35%)
Dcun1d2NP_001128270.1 UBA_like_SF 2..48 CDD:473871
Cullin_binding 136..246 CDD:460971 38/109 (35%)
Blue background indicates that the domain is not in the aligned region.

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