DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO4 and Dcun1d4

DIOPT Version :10

Sequence 1:NP_649204.2 Gene:SCCRO4 / 40231 FlyBaseID:FBgn0036967 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001423912.1 Gene:Dcun1d4 / 360928 RGDID:1310422 Length:306 Species:Rattus norvegicus


Alignment Length:234 Identity:144/234 - (61%)
Similarity:176/234 - (75%) Gaps:9/234 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRGKRRAADTISDNMDHGQPKRARTSYTSIPTQQSSRRHIRLEDGFSQKRCMAWFQEYTTPDEPE 66
            ||.|||.|.  .|::   ..|::|  :.|:..:..|.|....|:.||.|||:.||.||...:  :
  Rat    77 PRKKRRPAS--GDDL---SAKKSR--HDSMYRKYESTRIKTEEEAFSSKRCLEWFYEYAGTE--D 132

  Fly    67 TLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQMGFFSQQEWLKGLTELDCDSAAKMVVKLDYL 131
            .:||:|||||||||||||||:||||||:|:.|..||:|:.||||||:|.|.||:..|:...||||
  Rat   133 AVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYL 197

  Fly   132 RSILNDPNSFKSIYRYAYDFAKDSDQRCMDILTAKAMLQLLLGKHWPLYPQFAQFLEQSKYKAIN 196
            ||:|||..:||.|||||:|||::.|||.:||.|||.||.|||||.|||:|.|.|||||||||.||
  Rat   198 RSLLNDTTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVIN 262

  Fly   197 KDQWCNILEFSRTISIDLSNYDIDGAWPVMLDEFVEWLR 235
            ||||||:||||||||:||||||.||||||:|||||||.:
  Rat   263 KDQWCNVLEFSRTISLDLSNYDEDGAWPVLLDEFVEWYK 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO4NP_649204.2 Cullin_binding 123..233 CDD:460971 82/109 (75%)
Dcun1d4NP_001423912.1 None

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