DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO4 and dcn-1

DIOPT Version :10

Sequence 1:NP_649204.2 Gene:SCCRO4 / 40231 FlyBaseID:FBgn0036967 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_497866.2 Gene:dcn-1 / 175556 WormBaseID:WBGene00010428 Length:295 Species:Caenorhabditis elegans


Alignment Length:204 Identity:62/204 - (30%)
Similarity:103/204 - (50%) Gaps:24/204 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FQEYTTPDE---PETLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQMGFFSQQEWLKGLTELD 117
            |.:|..|.:   .:.:||.|:.:...|:|.|..:..:||||:|..|.....||..||:||:|.|.
 Worm    69 FNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEFSLDEWVKGMTALQ 133

  Fly   118 CDSAAKMVVKLDYLRSIL-NDPNSFKSIYRYAYDFAKDSDQRCMDILTAKAMLQLLLGKHWPLYP 181
            .|:...:..::|.:.|.| :|...|..:|.:|:::||.:..|.:|:.||.....:|.|:...:..
 Worm   134 ADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTIMT 198

  Fly   182 QFAQFL--------------------EQSKYKAINKDQWCNILEFSRTISIDLSNYDIDGAWPVM 226
            |:..||                    :|.|...|::|.|....:|......|||:||.:|||||:
 Worm   199 QWIDFLWAQENAAASRLAQNVGASNAKQFKSVWISRDTWNLFWDFILLSKPDLSDYDDEGAWPVL 263

  Fly   227 LDEFVEWLR 235
            :|:||::.|
 Worm   264 IDQFVDYCR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO4NP_649204.2 Cullin_binding 123..233 CDD:460971 37/130 (28%)
dcn-1NP_497866.2 UBA_DCNL 7..48 CDD:270535
Cullin_binding 140..270 CDD:460971 37/129 (29%)
Blue background indicates that the domain is not in the aligned region.

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