DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO4 and SCCRO

DIOPT Version :10

Sequence 1:NP_649204.2 Gene:SCCRO4 / 40231 FlyBaseID:FBgn0036967 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_313704.6 Gene:SCCRO / 1274563 VectorBaseID:AGAMI1_003992 Length:325 Species:Anopheles gambiae


Alignment Length:204 Identity:71/204 - (34%)
Similarity:118/204 - (57%) Gaps:5/204 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QKRCMAWFQEYTTPDEPETLGPDGMEKFCEDIGVEPENIVMLVLAYKMGATQMGFFSQQEWLKGL 113
            :|:....|..|..|.:|..:..||:|:|.||:.:.||:.::|::|::..|.....|::.|::.|.
Mosquito    57 KKKIEQLFNVYRDPSDPNKINSDGVERFLEDLHLNPESKLVLIIAWRFKAEAQCEFTRNEFINGF 121

  Fly   114 TELDCDSAAKMVVKLDYLRSILNDPNSFKSIYRYAYDFAKDSDQRCMDILTAKAMLQLLLGKHWP 178
            .:|..||..|:..||..|...|.||..||..|::.:::|||..|:.:|:..|.|...::|...:.
Mosquito   122 YDLGVDSIEKLKEKLPRLEQELKDPGRFKDFYQFTFNYAKDPGQKGLDLEMAIAYWNIVLNDRFK 186

  Fly   179 LYPQFAQFLEQSKYKAINKDQWCNILEFSRTISIDLSNYDIDGAWPVMLDEFVEWLRLQR----- 238
            ....:.:||.::..::|.||.|..:|:|:..|...:||||.:|||||::|:||||...|.     
Mosquito   187 FLDLWCKFLVENHKRSIPKDTWNLLLDFATYIDDSMSNYDAEGAWPVLIDDFVEWCLKQNKVTHP 251

  Fly   239 SQVTSTTGS 247
            |.:||||||
Mosquito   252 SVITSTTGS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRO4NP_649204.2 Cullin_binding 123..233 CDD:460971 39/109 (36%)
SCCROXP_313704.6 None

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