DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and Lgals1

DIOPT Version :9

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0052226 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_063969.1 Gene:Lgals1 / 56646 RGDID:69355 Length:135 Species:Rattus norvegicus


Alignment Length:138 Identity:34/138 - (24%)
Similarity:51/138 - (36%) Gaps:38/138 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 GTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRVIALHLNPRFN----ERTTVLNSMKES 887
            |..|::.|.:..||.....:|...|            ..:.||.|||||    ..|.|.||..:.
  Rat    15 GECLKVRGELAPDAKSFVLNLGKDS------------NNLCLHFNPRFNAHGDANTIVCNSKDDG 67

  Fly   888 EWLDEIRNDKMAFAPGA------TF---SLKIRALQDHYLIIVNNAVYTDYKY--RIDPESVTRL 941
            .|..|.|.....|.||:      ||   .|.|:....|           ::|:  |::.|::..:
  Rat    68 TWGTEQRETAFPFQPGSITEVCITFDQADLTIKLPDGH-----------EFKFPNRLNMEAINYM 121

  Fly   942 YVSGRIKL 949
            ...|..|:
  Rat   122 AADGDFKI 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Hyd_WA 210..238 CDD:283993
Hyd_WA 257..282 CDD:283993
TECPR 280..320 CDD:214782
TECPR 338..371 CDD:214782
PH-like 639..759 CDD:302622
Gal-bind_lectin 815..954 CDD:278752 34/138 (25%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Hyd_WA 1165..1192 CDD:283993
Hyd_WA 1209..1237 CDD:283993
Hyd_WA 1308..1333 CDD:283993
Lgals1NP_063969.1 GLECT 11..135 CDD:214596 34/138 (25%)
Beta-galactoside binding. /evidence=ECO:0000250 45..49 2/3 (67%)
Beta-galactoside binding. /evidence=ECO:0000250 69..72 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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