DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and Lgals1

DIOPT Version :10

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0288469 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_063969.1 Gene:Lgals1 / 56646 RGDID:69355 Length:135 Species:Rattus norvegicus


Alignment Length:138 Identity:34/138 - (24%)
Similarity:51/138 - (36%) Gaps:38/138 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 GTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRVIALHLNPRFN----ERTTVLNSMKES 887
            |..|::.|.:..||.....:|...|            ..:.||.|||||    ..|.|.||..:.
  Rat    15 GECLKVRGELAPDAKSFVLNLGKDS------------NNLCLHFNPRFNAHGDANTIVCNSKDDG 67

  Fly   888 EWLDEIRNDKMAFAPGA------TF---SLKIRALQDHYLIIVNNAVYTDYKY--RIDPESVTRL 941
            .|..|.|.....|.||:      ||   .|.|:....|           ::|:  |::.|::..:
  Rat    68 TWGTEQRETAFPFQPGSITEVCITFDQADLTIKLPDGH-----------EFKFPNRLNMEAINYM 121

  Fly   942 YVSGRIKL 949
            ...|..|:
  Rat   122 AADGDFKI 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Tectonin 210..398 CDD:465992
PH-like 639..759 CDD:473070
Gal-bind_lectin 821..953 CDD:459768 34/138 (25%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Tectonin <1165..1333 CDD:465992
Lgals1NP_063969.1 GLECT 11..135 CDD:214596 34/138 (25%)
Blue background indicates that the domain is not in the aligned region.

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