DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and lgals3

DIOPT Version :9

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0052226 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_988986.1 Gene:lgals3 / 394583 XenbaseID:XB-GENE-983743 Length:256 Species:Xenopus tropicalis


Alignment Length:152 Identity:43/152 - (28%)
Similarity:70/152 - (46%) Gaps:22/152 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   813 ETPYYNTLYNGMPCGTELEISGCVYDDADQIRFDL-QSHSAVKVQPHRVEKHRVIALHLNPRFNE 876
            :.||...|.:|:.....:.|.|.|..:|.:...|. :.|.              ||:|:||||:|
 Frog   121 KVPYELPLPSGVVHRLVITIHGTVNPNAKRFAIDFRRGHD--------------IAMHINPRFDE 171

  Fly   877 RTTVL--NSMKESEWLDEIRN-DKMAFAPGATFSLKIRALQDHYLIIVNNAVYTDYKYRI-DPES 937
            |..|:  |||..::|..|.|: .|..|..|..|.|::....|||.:.:||.....|.:|: :...
 Frog   172 RPHVIVRNSMIHNKWGHEERHAQKFPFVAGQPFKLQVMCEADHYKVAINNETLFQYVHRVKELHE 236

  Fly   938 VTRLYVSGRIKLFNVLYRCPSL 959
            :..:.::|.:.|..|   .||:
 Frog   237 IRSVCIAGDVTLNEV---TPSM 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Hyd_WA 210..238 CDD:283993
Hyd_WA 257..282 CDD:283993
TECPR 280..320 CDD:214782
TECPR 338..371 CDD:214782
PH-like 639..759 CDD:302622
Gal-bind_lectin 815..954 CDD:278752 41/143 (29%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Hyd_WA 1165..1192 CDD:283993
Hyd_WA 1209..1237 CDD:283993
Hyd_WA 1308..1333 CDD:283993
lgals3NP_988986.1 PABP-1234 <61..136 CDD:130689 4/14 (29%)
Gal-bind_lectin 129..252 CDD:214904 38/139 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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