DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex23 and lgals3b

DIOPT Version :10

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0288469 Length:1350 Species:Drosophila melanogaster
Sequence 2:XP_073783081.1 Gene:lgals3b / 325599 ZFINID:ZDB-GENE-030131-4324 Length:238 Species:Danio rerio


Alignment Length:222 Identity:52/222 - (23%)
Similarity:81/222 - (36%) Gaps:56/222 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   770 AGNAIWITSELGDVFVFDPANM----KAHQTSEPSE----------------------------- 801
            ||..:|.......|:...|||.    :.:|.:.|.:                             
Zfish    28 AGGPVWPGQPANPVWPGQPANPTWPGQPNQPAWPGQPNQQWPGQPGQPTAPGWPGPAPQTGPYGA 92

  Fly   802 -GYVEKMDVSTCETPYYNTLYNGMPCGTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRV 865
             |.|.::.....:.|..|..||.|    .:.|:|.|..:|.|...:|:             :...
Zfish    93 PGQVPQVLTVPLDFPLQNGAYNKM----LITINGEVKPNAKQFTVNLR-------------RGND 140

  Fly   866 IALHLNPRFNE---RTTVLNSMKESEWLDEIRN-DKMAFAPGATFSLKIRALQDHYLIIVNNAVY 926
            ||.|:||||:|   ...|.|||..:.|..|.|. ....|.||..|.:||......|.:.||.:..
Zfish   141 IAFHINPRFSEGGKPVIVRNSMIGNNWGREERELPSFPFVPGKPFEMKILITDTEYKVAVNKSHL 205

  Fly   927 TDYKYRI-DPESVTRLYVSGRIKLFNV 952
            .::|:|: :...:|.|.:...:.|..|
Zfish   206 LEFKHRVFELNQITGLSIYNDVTLSTV 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Tectonin 210..398 CDD:465992
PH-like 639..759 CDD:473070
Gal-bind_lectin 821..953 CDD:459768 39/137 (28%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Tectonin <1165..1333 CDD:465992
lgals3bXP_073783081.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.