DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and Lgals12

DIOPT Version :10

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0288469 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_001099803.1 Gene:Lgals12 / 293710 RGDID:1306914 Length:314 Species:Rattus norvegicus


Alignment Length:263 Identity:58/263 - (22%)
Similarity:105/263 - (39%) Gaps:55/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   815 PYYNTLYNGMPCGTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRVIALHLNPRFN--ER 877
            ||..|::.|:..|..:.:.|.|...|.:.:.|.|....:..:|.       :|.|.:|||.  :.
  Rat    26 PYVTTIFGGLYAGKMIMLQGVVPRHARRFQVDFQCGCCLHPRPD-------VAFHFSPRFYTVKP 83

  Fly   878 TTVLNSMKESEWLDEIRNDKMAFAPGATFSLKIRALQDHYLIIVNNAVYTDYKYRIDPESVTRLY 942
            ..:.|:::...|..|:|...:|...||:|.:......:...:.||...:..|:||:....|..|.
  Rat    84 HVICNTLQGGLWQKEVRWPGIALQKGASFLILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLD 148

  Fly   943 VSGRIKLFNVLYRCPSLIVSMERMHWRQMGGHIKRIFNSGVDVVWGISCDNTGWVYNGGWGG--M 1005
            :||.|.:..|.:...|..|...|.:   ..|:...:::..::|    .|...  :..|.|.|  :
  Rat   149 ISGDILVKAVGFLNISPFVEGSREY---PVGYPLLLYSPRLEV----PCSRA--LPRGLWPGQVI 204

  Fly  1006 FLKGL-------------EGSGKINPMIDTHTYYVYENQRWNPISGFTAKSLPTDRHM-WSDATG 1056
            .::||             :|:        ||.          |:   |.::..|||.: |..:.|
  Rat   205 VVRGLVLKEPKDFTLSLRDGA--------THV----------PV---TLRASFTDRTLAWVSSWG 248

  Fly  1057 RQK 1059
            |:|
  Rat   249 RKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Tectonin 210..398 CDD:465992
PH-like 639..759 CDD:473070
Gal-bind_lectin 821..953 CDD:459768 31/133 (23%)
TECPR 966..1000 CDD:214782 3/33 (9%)
DysFN 1021..1081 CDD:214777 11/40 (28%)
DysFC 1092..>1113 CDD:128935
Tectonin <1165..1333 CDD:465992
Lgals12NP_001099803.1 Gal-bind_lectin 33..158 CDD:214904 31/131 (24%)
Gal-bind_lectin 195..313 CDD:214904 17/78 (22%)
Blue background indicates that the domain is not in the aligned region.

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