DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and Lgals12

DIOPT Version :9

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0052226 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_001099803.1 Gene:Lgals12 / 293710 RGDID:1306914 Length:314 Species:Rattus norvegicus


Alignment Length:263 Identity:58/263 - (22%)
Similarity:105/263 - (39%) Gaps:55/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   815 PYYNTLYNGMPCGTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRVIALHLNPRFN--ER 877
            ||..|::.|:..|..:.:.|.|...|.:.:.|.|....:..:|.       :|.|.:|||.  :.
  Rat    26 PYVTTIFGGLYAGKMIMLQGVVPRHARRFQVDFQCGCCLHPRPD-------VAFHFSPRFYTVKP 83

  Fly   878 TTVLNSMKESEWLDEIRNDKMAFAPGATFSLKIRALQDHYLIIVNNAVYTDYKYRIDPESVTRLY 942
            ..:.|:::...|..|:|...:|...||:|.:......:...:.||...:..|:||:....|..|.
  Rat    84 HVICNTLQGGLWQKEVRWPGIALQKGASFLILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLD 148

  Fly   943 VSGRIKLFNVLYRCPSLIVSMERMHWRQMGGHIKRIFNSGVDVVWGISCDNTGWVYNGGWGG--M 1005
            :||.|.:..|.:...|..|...|.:   ..|:...:::..::|    .|...  :..|.|.|  :
  Rat   149 ISGDILVKAVGFLNISPFVEGSREY---PVGYPLLLYSPRLEV----PCSRA--LPRGLWPGQVI 204

  Fly  1006 FLKGL-------------EGSGKINPMIDTHTYYVYENQRWNPISGFTAKSLPTDRHM-WSDATG 1056
            .::||             :|:        ||.          |:   |.::..|||.: |..:.|
  Rat   205 VVRGLVLKEPKDFTLSLRDGA--------THV----------PV---TLRASFTDRTLAWVSSWG 248

  Fly  1057 RQK 1059
            |:|
  Rat   249 RKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Hyd_WA 210..238 CDD:283993
Hyd_WA 257..282 CDD:283993
TECPR 280..320 CDD:214782
TECPR 338..371 CDD:214782
PH-like 639..759 CDD:302622
Gal-bind_lectin 815..954 CDD:278752 35/140 (25%)
TECPR 966..1000 CDD:214782 3/33 (9%)
DysFN 1021..1081 CDD:214777 11/40 (28%)
DysFC 1092..>1113 CDD:128935
Hyd_WA 1165..1192 CDD:283993
Hyd_WA 1209..1237 CDD:283993
Hyd_WA 1308..1333 CDD:283993
Lgals12NP_001099803.1 Gal-bind_lectin 26..160 CDD:395266 35/140 (25%)
Gal-bind_lectin 195..313 CDD:214904 17/78 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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