DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex23 and F49F1.9

DIOPT Version :9

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0052226 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_500490.1 Gene:F49F1.9 / 186065 WormBaseID:WBGene00018649 Length:210 Species:Caenorhabditis elegans


Alignment Length:92 Identity:24/92 - (26%)
Similarity:35/92 - (38%) Gaps:25/92 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 LNSMKESEWL------DEIR--------NDKM---------AFAPGATFSLKIRALQDHYLIIVN 922
            :|..:|.|||      .::|        |.|.         .|..||.|::.:.....|..|.||
 Worm   110 INLDREKEWLFHFASQPDLRRVVRTRHLNGKFLLGDTYGGNPFPAGANFNVTMINQPTHIEIYVN 174

  Fly   923 NAVYTDYKYRIDPESVTRLYV--SGRI 947
            ...:|:|.:|....|....||  ||.:
 Worm   175 QVFFTNYNHRTPNPSRNYQYVVFSGNV 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Hyd_WA 210..238 CDD:283993
Hyd_WA 257..282 CDD:283993
TECPR 280..320 CDD:214782
TECPR 338..371 CDD:214782
PH-like 639..759 CDD:302622
Gal-bind_lectin 815..954 CDD:278752 24/92 (26%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Hyd_WA 1165..1192 CDD:283993
Hyd_WA 1209..1237 CDD:283993
Hyd_WA 1308..1333 CDD:283993
F49F1.9NP_500490.1 GLECT 82..209 CDD:214596 24/92 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.