DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex23 and lec-4

DIOPT Version :9

Sequence 1:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0052226 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_497763.1 Gene:lec-4 / 175488 WormBaseID:WBGene00002267 Length:283 Species:Caenorhabditis elegans


Alignment Length:244 Identity:51/244 - (20%)
Similarity:83/244 - (34%) Gaps:63/244 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   791 MKAHQTSEPSEGYVEKMDVSTCETPYYNTLYNGMPCGTELEISGCVYDDADQIRFDLQSHSAVKV 855
            |.:|:...|            ...||.:.|...:..|..|.:.|.:.:.|.....:|.....   
 Worm     1 MSSHENDTP------------LPVPYTSRLGQPLDAGQTLNVHGKINEGAQVAEINLLQGGG--- 50

  Fly   856 QPHRVEKHRVIALHLNPRFNERTTVLNSMKESEWLDEIRNDKMAFAPGATFSLKIRALQDHYLII 920
               .:..:..:.|||...|.|:..:|||.:...|..|.| :.:.|..|..|.|:||.|.:...|.
 Worm    51 ---EIGPNTQVILHLKLNFKEKKVILNSYENGVWGKEER-ESLPFQAGQEFDLRIRVLDEGLEIS 111

  Fly   921 VNNAVYTDYKYRIDPESVTRLYVSGRIKLFNVLYRCPSLIVSMERMHWRQMGGHIKRIFNSGVDV 985
            .:|....::|:|:..:|:..|.|.|.:              |:..:||   ||..          
 Worm   112 ADNKKIHEFKHRLPFQSIEYLSVRGDL--------------SLNGIHW---GGRF---------- 149

  Fly   986 VWGISCDNTGWVYNGGWGGMFLKGLEGSGKINPMIDTHTYYVYENQRWN 1034
                        |...|...|..|....|:     ..|.|.:.:..||:
 Worm   150 ------------YKLPWETAFPAGFLEKGQ-----RVHLYGIPKGDRWS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Hyd_WA 210..238 CDD:283993
Hyd_WA 257..282 CDD:283993
TECPR 280..320 CDD:214782
TECPR 338..371 CDD:214782
PH-like 639..759 CDD:302622
Gal-bind_lectin 815..954 CDD:278752 34/138 (25%)
TECPR 966..1000 CDD:214782 5/33 (15%)
DysFN 1021..1081 CDD:214777 4/14 (29%)
DysFC 1092..>1113 CDD:128935
Hyd_WA 1165..1192 CDD:283993
Hyd_WA 1209..1237 CDD:283993
Hyd_WA 1308..1333 CDD:283993
lec-4NP_497763.1 GLECT 14..145 CDD:214596 34/151 (23%)
GLECT 154..282 CDD:214596 8/33 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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