DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgC and GLC7

DIOPT Version :10

Sequence 1:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_011059.3 Gene:GLC7 / 856870 SGDID:S000000935 Length:312 Species:Saccharomyces cerevisiae


Alignment Length:317 Identity:100/317 - (31%)
Similarity:163/317 - (51%) Gaps:29/317 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NHIDLLIDVFRKKRGNR--LHPKYVALILREAAK-SLKQLPNISPVSTAVSQQVTVCGDLHGKLD 249
            |.||.|::|...|.|.:  |....:..:..:|.. .:||     |:...:...:.:|||:||:..
Yeast    10 NIIDRLLEVRGSKPGQQVDLEENEIRYLCSKARSIFIKQ-----PILLELEAPIKICGDIHGQYY 69

  Fly   250 DLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARY 314
            |||.:....|.|..|| |:|.||:|||||:.||.:.|||:..:.:|...|:.|||||.:.:|..|
Yeast    70 DLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIY 133

  Fly   315 GFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVS 378
            ||..|.:.:|  |.|....|.| .:..||:.::::.::..:|||.| |..|::.|:.:.|     
Yeast   134 GFYDECKRRY--NIKLWKTFTD-CFNCLPIAAIIDEKIFCMHGGLSPDLNSMEQIRRVMR----- 190

  Fly   379 ILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIR 443
                      |.|..:...:.|::||||...:.......||....|||||.:.|||:..:..:.|
Yeast   191 ----------PTDIPDVGLLCDLLWSDPDKDIVGWSENDRGVSFTFGPDVVNRFLQKQDMELICR 245

  Fly   444 SHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQT 500
            :|:...:|:||....:::|:|||.||.....|.||.:.::..|:..| |.:..|.::
Yeast   246 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSF-QILKPAQKS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgCNP_536738.3 IQ 89..111 CDD:197470
MPP_RdgC 184..494 CDD:277364 99/309 (32%)
FRQ1 527..681 CDD:444056
EFh 616..681 CDD:238008
GLC7NP_011059.3 MPP_PP1_PPKL 7..297 CDD:277359 99/311 (32%)
Blue background indicates that the domain is not in the aligned region.

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