Protein Alignment rdgC and SIT4

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_010236.1
• Gene: SIT4 / 851513
• SGDID: S000002205
• Length: 311
• Species: Saccharomyces cerevisiae
• Alignment Length: 285
• Identity: 92/285 - (32%)
• Similarity: 144/285 - (50%)
• Gaps: 32/285 - (11%)

  Fly   214 LREAAKSLKQL----PNISPVSTAVSQQVTVCGDLHGKLDDLLVVLH-KNGLPSSSNPYVFNGDF 273
            :::..:.:|:|    .||.||.|    .||||||:||:..|||.:.. ..|.|...| |:|.||:
Yeast    24 MKQLCEMVKELLMEESNIQPVQT----PVTVCGDIHGQFHDLLELFRTAGGFPDDIN-YIFLGDY 83

  Fly   274 VDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEV 338
            ||||...||...||:.|.:.:|..:.|.|||||...:...|||..|..:||  ....:..:..:|
Yeast    84 VDRGYYSLETFTLLMCLKVKYPAKITLVRGNHESRQITQVYGFYEECLNKY--GSTTVWKYCCQV 146

  Fly   339 YRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIM 402
            :.:|.|.::::.::|.||||.| :...||.|:.:.|.:.|     |...|          ..|::
Yeast   147 FDFLTLAAIIDGKILCVHGGLSPEIRMLDQIRVLSRAQEV-----PHEGG----------FSDLL 196

  Fly   403 WSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNK-IITIFSA 466
            ||||. .:.....:.||||..||..|...|...:.|:.:.|:|:....|.::....| ::|::||
Yeast   197 WSDPD-NVEAWQVSPRGAGWLFGSKVAREFNHVNGLNLIARAHQLVMEGFKYHFPEKDVVTVWSA 260

  Fly   467 SNY-YAIGSNKGAYIRLNNQLMPHF 490
            .|| |..| |..:.::::..|.|.|
Yeast   261 PNYCYRCG-NVASVMKVDEDLEPTF 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	92/285 (32%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
SIT4	NP_010236.1	MPP_PP2A_PP4_PP6	7..291	CDD:277360	92/285 (32%)