DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgC and FYPP1

DIOPT Version :10

Sequence 1:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_175454.1 Gene:FYPP1 / 841459 AraportID:AT1G50370 Length:303 Species:Arabidopsis thaliana


Alignment Length:313 Identity:99/313 - (31%)
Similarity:153/313 - (48%) Gaps:32/313 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 VFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGL 260
            :.:.|.|..|....:.|:.....:.|.:..|:.||::    .||||||:||:..||:.:....|.
plant     7 ISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGH 67

  Fly   261 PSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYP 325
            ...:| |:|.|||||||...|||..:||.|....|..:.|.|||||...:...|||..|.:.|| 
plant    68 VPETN-YIFMGDFVDRGYNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDECQRKY- 130

  Fly   326 RNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSILRPPLTDGEP 389
             .:.....:..:|:.:|.|.::::..||.||||.| |..::|.|:.|:|...:....|       
plant   131 -GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRLIERNCEIPHEGP------- 187

  Fly   390 LDKTEWQQIFDIMWSDPQ--ATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGH 452
                    ..|:|||||:  .|....|   ||||..||..||..|...:.|..|.|:|:....|.
plant   188 --------FCDLMWSDPEDIETWAVSP---RGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGL 241

  Fly   453 EFMHDNK-IITIFSASNY-YAIGSNKGAYIRLNNQLMPHFVQYISAASQTKRL 503
            ::|..:| ::|::||.|| |..| |..:.:..|:. |...|::.:...:..::
plant   242 KYMFQDKGLVTVWSAPNYCYRCG-NVASILSFNDN-MEREVKFFTETEENNQM 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgCNP_536738.3 IQ 89..111 CDD:197470
MPP_RdgC 184..494 CDD:277364 99/302 (33%)
FRQ1 527..681 CDD:444056
EFh 616..681 CDD:238008
FYPP1NP_175454.1 MPP_PP2A_PP4_PP6 2..285 CDD:277360 99/304 (33%)
Blue background indicates that the domain is not in the aligned region.

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