Protein Alignment rdgC and TOPP8

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001330891.1
• Gene: TOPP8 / 832846
• AraportID: AT5G27840
• Length: 330
• Species: Arabidopsis thaliana
• Alignment Length: 332
• Identity: 100/332 - (30%)
• Similarity: 174/332 - (52%)
• Gaps: 31/332 - (9%)

  Fly   185 IRKNHIDLLIDVFRKKRGNRLHPKYVALI---LREAAKSLKQLPNISPVSTAVSQQVTVCGDLHG 246
            :.|..:|.:|....:.:|.    |.|.|.   :|:...:.:|:....|....:...:.:|||:||
plant     9 VEKGVLDDIIRRLLEGKGG----KQVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHG 69

  Fly   247 KLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMN 311
            :..|||.:....|.|.|:| |:|.||:|||||:.||.:.|||:..:.:|:.::|.||||||:.:|
plant    70 QYQDLLRLFEYGGYPPSAN-YLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRGNHEDAKIN 133

  Fly   312 ARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGK 375
            ..|||..|.:.::   :.|:.....:.:..||:.::::.::|.:|||.| |..:|:.|:.|.|
plant   134 RIYGFYDECKRRF---NVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLDNLNQIREIQR-- 193

  Fly   376 YVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSY 440
                         |::..:...:.|::||||...:....::.||....||.|....||.::.|..
plant   194 -------------PIEIPDSGLLCDLLWSDPDQKIEGWADSDRGISCTFGADKVAEFLDKNDLDL 245

  Fly   441 VIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHF-VQYISAASQT---K 501
            :.|.|:...:|:||....:::|||||.||.....|.||.:.::..|:..| :...:.||.:   |
plant   246 ICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKPAPASSSHPLK 310

  Fly   502 RLSFKQR 508
            ::||.||
plant   311 KVSFYQR 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	93/313 (30%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
TOPP8	NP_001330891.1	MPP_PP1_PPKL	13..300	CDD:277359	92/309 (30%)