DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgC and BSL1

DIOPT Version :10

Sequence 1:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_192217.2 Gene:BSL1 / 828097 AraportID:AT4G03080 Length:881 Species:Arabidopsis thaliana


Alignment Length:343 Identity:106/343 - (30%)
Similarity:171/343 - (49%) Gaps:58/343 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 NAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILR--------------------EAAKSLK 222
            |:.:..|.:|        ..|:|....||.|.:|.:||                    |...:.:
plant   507 NSDVPQPTKK--------FTRQKSPQGLHKKVIAALLRPRNWKPPGNRKFFLDSYEVGELCYAAE 563

  Fly   223 QLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSN-----PYVFNGDFVDRGKRGLE 282
            |:.........:...:.|.|||||:..||:.:..:.|.||::.     .|:|.||:||||:..||
plant   564 QIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE 628

  Fly   283 VLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAF--IDEVYRWLPLG 345
            .:.|||:|.:.:|..|.|.|||||.:.:||.:||..|...:...| ..|.|:  .::::.:|||.
plant   629 TITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGEN-DGIWAWTRFNQLFNYLPLA 692

  Fly   346 SVLNSRVLIVHGGFSDSTS-LDLIKSIDRGKYVSILRPPLT-DGEPLDKTEWQQIFDIMWSDP-- 406
            :::.::::.:|||...|.| ::.|:.|:|         |:| |...|      .:.|::||||  
plant   693 ALIENKIICMHGGIGRSISTVEQIEKIER---------PITMDAGSL------VLMDLLWSDPTE 742

  Fly   407 -QATMGCVPNTLRGAG-VWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNY 469
             .:..|..||. ||.| |.||||....|.:|::|..:||:|||..:|.|.....::||:|||:||
plant   743 NDSIEGLRPNA-RGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNY 806

  Fly   470 YAIGSNKGAYIRLNNQLM 487
            ....:|.||.:.:...|:
plant   807 CGTANNAGAILVVGRGLV 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgCNP_536738.3 IQ 89..111 CDD:197470
MPP_RdgC 184..494 CDD:277364 105/337 (31%)
FRQ1 527..681 CDD:444056
EFh 616..681 CDD:238008
BSL1NP_192217.2 Kelch_4 29..94 CDD:433191
KELCH repeat 30..92 CDD:276965
NanM 66..344 CDD:442289
KELCH repeat 99..149 CDD:276965
KELCH repeat 152..201 CDD:276965
KELCH repeat 205..255 CDD:276965
MPP_Bsu1_C 530..832 CDD:277363 98/312 (31%)
Blue background indicates that the domain is not in the aligned region.

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