Protein Alignment rdgC and TOPP5

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_190266.1
• Gene: TOPP5 / 823835
• AraportID: AT3G46820
• Length: 312
• Species: Arabidopsis thaliana
• Alignment Length: 346
• Identity: 107/346 - (30%)
• Similarity: 170/346 - (49%)
• Gaps: 58/346 - (16%)

  Fly   153 QYQGSAHVSVLDDKDDLVEEFGDIVNAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREA 217
            |.|||...:||||                  .||:     |:|....|.|.:      ..:|.::
plant     4 QGQGSMDPAVLDD------------------IIRR-----LLDYRNPKAGTK------QAMLNDS 39

  Fly   218 AKSLKQLPNIS-------PVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVD 275
              .::||..:|       |....::..|.:|||:||:..|||.:....|.|.::| |:|.||:||
plant    40 --EIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQYSDLLRLFEYGGFPPAAN-YLFLGDYVD 101

  Fly   276 RGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYR 340
            |||:.||.:.|||:..:.:|...||.|||||.:.:|..|||..|.:.::  |.|....|.| .:.
plant   102 RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF--NVKLWKVFTD-TFN 163

  Fly   341 WLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWS 404
            .||:.:|::.::|.:|||.| :..:::.||:|:|               |.|..:...:.|::||
plant   164 CLPVAAVIDEKILCMHGGLSPELINVEQIKNIER---------------PTDVPDAGLLCDLLWS 213

  Fly   405 DPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNY 469
            ||...:.......||....||.|....||.::.:..|.|:|:...:|:||..|.:::|:|||.||
plant   214 DPSKDVKGWGMNDRGVSYTFGADKVAEFLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAPNY 278

  Fly   470 YAIGSNKGAYIRLNNQLMPHF 490
            .....|.||.:.::..||..|
plant   279 CGEFDNAGALMSVDESLMCSF 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	99/315 (31%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
TOPP5	NP_190266.1	MPP_PP1_PPKL	13..304	CDD:277359	103/337 (31%)