Protein Alignment rdgC and TOPP4

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_181514.1
• Gene: TOPP4 / 818571
• AraportID: AT2G39840
• Length: 321
• Species: Arabidopsis thaliana
• Alignment Length: 323
• Identity: 106/323 - (32%)
• Similarity: 164/323 - (50%)
• Gaps: 39/323 - (12%)

  Fly   192 LLIDVFRKKRGNRLHPKYVALILREAAKSLKQL-----------PNISPVSTAVSQQVTVCGDLH 245
            :|.|:.|:....||......:.|.||  .:|||           ||:..:...:.    :|||:|
plant    18 VLDDIIRRLTEVRLARPGKQVQLSEA--EIKQLCTTARDIFLQQPNLLELEAPIK----ICGDIH 76

  Fly   246 GKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVM 310
            |:..|||.:....|.|.|:| |:|.||:|||||:.||.:.|||:..:.:|...||.|||||.:.:
plant    77 GQYSDLLRLFEYGGFPPSAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPGNFFLLRGNHECASI 140

  Fly   311 NARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRG 374
            |..|||..|.:.::   :.|:.....:.:..||:.::::.::|.:|||.| |...||.|:::.
plant   141 NRIYGFYDECKRRF---NVRVWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLDHLDEIRNLP-- 200

  Fly   375 KYVSILRPPLTDGEPLDKTEWQQIFDIMWSDP-QATMGCVPNTLRGAGVWFGPDVTDNFLQRHRL 438
                  ||.:.....|       :.|::|||| :...|...|. ||....||||....||.:|.|
plant   201 ------RPTMIPDTGL-------LCDLLWSDPGKDVKGWGMND-RGVSYTFGPDKVSEFLTKHDL 251

  Fly   439 SYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQTK 501
            ..|.|:|:...:|:||..|.:::|:|||.||.....|.||.:.::..||..|.....|..:||
plant   252 DLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTK 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	103/314 (33%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
TOPP4	NP_181514.1	MPP_PP1_PPKL	18..308	CDD:277359	103/315 (33%)