Protein Alignment rdgC and Pp1-Y1

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001104152.3
• Gene: Pp1-Y1 / 5740113
• FlyBaseID: FBgn0261399
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 294
• Identity: 97/294 - (32%)
• Similarity: 148/294 - (50%)
• Gaps: 27/294 - (9%)

  Fly   219 KSLKQLPNI---SPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRG 280
            |.|||...:   .|:...|...|.|.||:||:.:|||.....:|.|.... |:..||:|||||..
  Fly    42 KLLKQARQVLMSEPMLLTVEAPVNVLGDIHGQYNDLLRYFETSGHPPKKR-YLMLGDYVDRGKYS 105

  Fly   281 LEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLG 345
            :|.|.|||:..:.:|.::.|.|||||.:.:|..|||..|.:.::.....|:  |:| .|..||:.
  Fly   106 VETLTLLLAYKVRYPTSIHLLRGNHESAAINRYYGFYDECKRRFTIRLWRM--FVD-CYDCLPVA 167

  Fly   346 SVLNSRVLIVHGGFSDSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQAT- 409
            :::||::...|||.  |.||..:..|..     :.||...|...|       :.|::||||..|
  Fly   168 AIINSKIFCCHGGL--SPSLHNLNDIQH-----LQRPAEVDRNGL-------LCDLLWSDPDPTA 218

  Fly   410 MGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGS 474
            :|...|: ||....||.|:.:.||.|.....:.|:|:...:|:||....::||:|||.||.....
  Fly   219 IGWEKNS-RGVSFTFGVDIVETFLSRFSFDLICRAHQVVEDGYEFFAKRQLITVFSAVNYCGEFD 282

  Fly   475 NKGAYIRLNNQLMPHFVQYISAASQTKRLSFKQR 508
            |.||.:.::.:|....|    .....||::|..:
  Fly   283 NAGAMMCVDAELNITLV----VMKPKKRIAFSTK 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	94/278 (34%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
Pp1-Y1	NP_001104152.3	MPP_superfamily	17..303	CDD:472684	94/283 (33%)