DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgC and ppp3cca

DIOPT Version :9

Sequence 1:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_005171933.1 Gene:ppp3cca / 557926 ZFINID:ZDB-GENE-030829-36 Length:508 Species:Danio rerio


Alignment Length:335 Identity:103/335 - (30%)
Similarity:158/335 - (47%) Gaps:54/335 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VNAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVC 241
            |:.|....:.|||:        .|.| |:.......|:.:.|..|:|    ......|...:|||
Zfish    35 VDGKPNTELLKNHL--------IKEG-RVEEDAALRIINDGANILRQ----EKCMLEVEAPITVC 86

  Fly   242 GDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHE 306
            ||:||:..||:.:....|.|.::. |:|.||:||||...:|.:|.|.:|.:..||.:||.|||||
Zfish    87 GDVHGQFFDLMKLFEVGGSPDNTR-YLFLGDYVDRGYFSIECVLFLWTLKINHPNTLFLLRGNHE 150

  Fly   307 DSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKS 370
            ...:...:.|.:|.:.||   .:|:.....|.:..|||.::||.:.|.||||.| :...||.|:.
Zfish   151 CRHLTEYFTFKQECKIKY---SERVYDACMEAFDCLPLAALLNQQFLCVHGGLSPEINCLDDIRK 212

  Fly   371 IDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVP-------NTLRGAGVWFGPDV 428
            :||.|     .||          .:..:.|::|:||....|...       |::||...:|....
Zfish   213 LDRFK-----EPP----------AFGPMCDLIWADPGEDYGSEKTAEHFNHNSVRGCSYFFSYAA 262

  Fly   429 TDNFLQRHRLSYVIRSHECKPNGHEFMHDNK------IITIFSASNYYAIGSNKGAYIRLNNQLM 487
            ..:||..:.|..|||:||.:..|:.....::      :||||||.||..:.:||.|.::..|.:|
Zfish   263 VCDFLTNNNLLSVIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 327

  Fly   488 --------PH 489
                    ||
Zfish   328 NIRQFNCSPH 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgCNP_536738.3 IQ 89..111 CDD:197470
MPP_RdgC 184..494 CDD:277364 101/328 (31%)
EFh 616..681 CDD:238008
ppp3ccaXP_005171933.1 MPP_PP2B 39..343 CDD:277361 101/331 (31%)
PP2Ac 59..327 CDD:197547 92/290 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574287
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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