Protein Alignment rdgC and ppp3cb

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: XP_009305997.1
• Gene: ppp3cb / 550554
• ZFINID: ZDB-GENE-050417-406
• Length: 522
• Species: Danio rerio
• Alignment Length: 326
• Identity: 106/326 - (32%)
• Similarity: 159/326 - (48%)
• Gaps: 49/326 - (15%)

  Fly   187 KNHIDLLIDVFRKKRGNRLHPKYVAL-ILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDD 250
            |..:||| .....|.|....|  ||| |:.|.|..|:|    ......:...||||||:||:..|
Zfish    40 KPRVDLL-KAHLTKEGRVEEP--VALRIVNEGAAILRQ----EKTMLDIEAPVTVCGDIHGQFFD 97

  Fly   251 LLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYG 315
            |:.:....|.|:::. |:|.||:||||...:|.:|.|.||.:.:|..:||.|||||...:...:.
Zfish    98 LMKLFEVGGSPATTR-YLFLGDYVDRGYFSIECVLYLWSLKILYPKTLFLLRGNHECRHLTEYFT 161

  Fly   316 FIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSI 379
            |.:|.:.||   .:::.....:.:..|||.:::|.:.|.||||.| :..:||.||.:||.|
Zfish   162 FKQECKIKY---SEQVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIKRLDRFK---- 219

  Fly   380 LRPPLTDGEPLDKTEWQQIFDIMWSDPQATMG-------CVPNTLRGAGVWFGPDVTDNFLQRHR 437
             .||          .:..:.|::||||....|       ...||:||...::.......|||.:.
Zfish   220 -EPP----------AFGPMCDLLWSDPLEDFGNEKSQDYFSHNTVRGCSYFYSYPAVCEFLQTNN 273

  Fly   438 LSYVIRSHECKPNGHEFMHDNK------IITIFSASNYYAIGSNKGAYIRLNNQLM--------P 488
            |..|||:||.:..|:.....::      :||||||.||..:.:||.|.::..|.:|        |
Zfish   274 LLSVIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSP 338

  Fly   489 H 489
            |
Zfish   339 H 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	106/326 (33%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
ppp3cb	XP_009305997.1	MPP_PP2B	41..345	CDD:277361	105/325 (32%)