Protein Alignment rdgC and PpY-55A

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_476689.1
• Gene: PpY-55A / 48532
• FlyBaseID: FBgn0003140
• Length: 314
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 90/308 - (29%)
• Similarity: 153/308 - (49%)
• Gaps: 28/308 - (9%)

  Fly   188 NHIDLLIDVFRKKRGNR--LHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDD 250
            :.||.:|.......|:.  |..:.:..::::..:.:|.    .|:...:...|.:|||:||:..|
  Fly     7 HEIDCIIKELTSLNGSECTLKEELIERLIQQTREVIKW----QPMLLELQAPVNICGDIHGQFTD 67

  Fly   251 LLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYG 315
            ||.:....|.|..:| |:|.||:|||||:.||.:.||.:..:.:|...||.|||||.:.:|..||
  Fly    68 LLRIFKACGFPPKAN-YLFLGDYVDRGKQSLETICLLFAYKVKYPLNFFLLRGNHESASINKIYG 131

  Fly   316 FIREVESKYPRNHK-RILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSIDRGKYVS 378
            |..|::    |.|. |:.....:.:.|||:.:::..|:...|||.|.| .:|..|..|.|
  Fly   132 FYDEIK----RRHTVRLWHSFTDCFNWLPVAALVGERIFCCHGGLSPSLRNLQQINHIQR----- 187

  Fly   379 ILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIR 443
                      |.|..:...:.|::|:|...|.....:..||....|...:..:||:...|..::|
  Fly   188 ----------PTDIPDEGIMCDLLWADLNHTTKGWGHNDRGVSFTFDKVIVRDFLKAFDLQLMVR 242

  Fly   444 SHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFV 491
            :||...:|:||..:.:::|:|||.||..:.:|.|..:.::..|:..||
  Fly   243 AHEVVEDGYEFFANRQLVTVFSAPNYCGMMNNAGGVMSVSTDLICSFV 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	90/308 (29%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
PpY-55A	NP_476689.1	MPP_PP1_PPKL	8..294	CDD:277359	90/307 (29%)