Protein Alignment rdgC and Pp2B-14D

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_523373.2
• Gene: Pp2B-14D / 32624
• FlyBaseID: FBgn0011826
• Length: 570
• Species: Drosophila melanogaster
• Alignment Length: 353
• Identity: 103/353 - (29%)
• Similarity: 165/353 - (46%)
• Gaps: 63/353 - (17%)

  Fly   177 VNAK----IELPIRKNHIDLLIDVFRKKRG--------------NRLHPKYVALILREAAKSLKQ 223
            ||.|    ..:|...:|...|.:||.::.|              .|:.......|:::.|..|:|
  Fly    76 VNTKERVVDSVPFPPSHKLTLAEVFDQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQ 140

  Fly   224 LPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLL 288
                ......:...||||||:||:..||:.:....|.|:|:. |:|.||:||||...:|.:|.|.
  Fly   141 ----EKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTK-YLFLGDYVDRGYFSIECVLYLW 200

  Fly   289 SLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVL 353
            ||.:.:|..:||.|||||...:...:.|.:|.:.||   .:|:.....:.:..|||.:::|.:.|
  Fly   201 SLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY---SERVYDACMDAFDCLPLAALMNQQFL 262

  Fly   354 IVHGGFS-DSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMG------ 411
            .||||.| :...|:.|:.:||.|     .||          .:..:.|::||||....|
  Fly   263 CVHGGLSPEIHELEDIRRLDRFK-----EPP----------AFGPMCDLLWSDPLEDFGNEKNSD 312

  Fly   412 -CVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNK------IITIFSASNY 469
             ...|::||...::......:|||.:.|..:||:||.:..|:.....::      :||||||.||
  Fly   313 FYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNY 377

  Fly   470 YAIGSNKGAYIRLNNQLM--------PH 489
            ..:.:||.|.::..|.:|        ||
  Fly   378 LDVYNNKAAVLKYENNVMNIRQFNCSPH 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	100/342 (29%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
Pp2B-14D	NP_523373.2	MPP_PP2B	107..411	CDD:277361	94/322 (29%)