Protein Alignment rdgC and Ppef2

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: XP_038947795.1
• Gene: Ppef2 / 305246
• RGDID: 1307093
• Length: 793
• Species: Rattus norvegicus
• Alignment Length: 796
• Identity: 295/796 - (37%)
• Similarity: 419/796 - (52%)
• Gaps: 149/796 - (18%)

  Fly    35 VGASMQTLGPNGQ--PQSSAAQTSTRASSLLQLFQRRGWCKHFRKPLRGMSASRAEKTIRAAIFI 97
            |...:.:||....  |..:...::..:||..|        .||       :...|||..:||..|
  Rat    16 VSKPLPSLGSGSTVCPAGALCLSTMGSSSSTQ--------HHF-------AFQNAEKAFKAAALI 65

  Fly    98 QKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKFFNDLIKHMPQAAGRKNQYQGSAHVSV 162
            |:||||:.||.||:|||.|.|||::|||.:|||.:|::||:.|:.|...::..:..:........
  Rat    66 QRWYRRYMARLEMRRRCTWNIFQSIEYAGQQDQVKLHEFFSYLVDHFTPSSHHERDFLNRMFTEE 130

  Fly   163 LDDKDDLVEEFGDI---------VNAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREAA 218
            ...:|...||.||.         ...::..|:..:|...|::.||.::  :||.:||..:|.|..
  Rat   131 RFAQDVETEEGGDFESIEVPDSYTGPRLSFPLLPDHATALVEAFRLRQ--QLHARYVLNLLYETR 193

  Fly   219 KSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEV 283
            :.|.|||||:.|||..|::|||||||||:||||:.:.:||||||....||||||||||||..:||
  Rat   194 RHLAQLPNINRVSTCYSEEVTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEV 258

  Fly   284 LLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVL 348
            |::|.:..|.:|....||||||||.::|.||||.:||..||..:.|:||..:.:|:.||||.:::
  Rat   259 LMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKEVMHKYKIHGKKILRTLQDVFCWLPLATLV 323

  Fly   349 NSRVLIVHGGFSDSTSLDLIKSIDRGKYVSILR-------------------------------- 381
            :.:||::|||.||.|.|:|:..:||.|.||.:|
  Rat   324 DEKVLVLHGGVSDKTDLELLAKLDRHKIVSTMRCKTRKESENLEEQKRKDNQTSSAQKPTPWFLP 388

  Fly   382 ---------------------------P------------------------------------- 382
                                       |
  Rat   389 QSRSLPSSPFHLGSGFKAYKACRSCSIPCGSAVSKELSRQGQVRRSMDLELELCRQQAGFLGIRE 453

  Fly   383 -----PLTD-----GEPLDKT--EWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQR 435
                 ||.|     |..|..|  ||:|:.||:||||.|..||..||:||.|.:||||||:..:::
  Rat   454 KRESLPLADCDADAGGMLKPTPEEWKQVVDILWSDPMAQEGCKANTVRGGGCYFGPDVTEQLMEK 518

  Fly   436 HRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQT 500
            ::|.::||||||||.|:||.|:.|::|||||||||.:|||:|||::|...|.||.||| .|...|
  Rat   519 YKLQFLIRSHECKPEGYEFCHNRKVLTIFSASNYYEVGSNRGAYVKLGPALTPHIVQY-QANKAT 582

  Fly   501 KRLSFKQRMGIVESSALKELAVRMRDHRDELEDEFRKYDPKDSGYISISHWCKVMENVTKLGLPW 565
            .||:.:||:..||.|||:.|..::..|..:|..||||.||.:||.|::|.|...:|.|..|||||
  Rat   583 HRLTMRQRISRVEESALRALRQKLFAHSSDLLVEFRKRDPDESGVITLSDWAVAVEAVLHLGLPW 647

  Fly   566 RLLRDKLAPGTDSQKVNYNRTLDLLDTDVILEAEADGMSVMDALYANKASLVAIFNIIDADNSGE 630
            |:||.:|...:....:.|...||.|..:. |..|....|:::.||.|:::|..||.|||:|:||.
  Rat   648 RMLRPQLVNSSADNVLEYKSWLDSLAKEQ-LSRENIQSSLLEKLYRNRSNLETIFRIIDSDHSGF 711

  Fly   631 ITLDEFETAIDLLVAHMPGAYSKAEMLEKCRMMDLNGDGKVDLNEFLEAFRLSDLHRKEQQDENI 695
            |:||||.....|..:||....:...:.:..|.:|.|.||.:|:|||||||||.:
  Rat   712 ISLDEFRQTWKLFSSHMNIDITDDGICDLARSIDFNKDGHIDINEFLEAFRLVE----------- 765

  Fly   696 RRRSTGRPSVAKTATD 711
            :..|.|:.|....:||
  Rat   766 QSCSEGQASACPQSTD 781

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470	12/21 (57%)
		MPP_RdgC	184..494	CDD:277364	164/417 (39%)
		FRQ1	527..681	CDD:444056	63/153 (41%)
		EFh	616..681	CDD:238008	29/64 (45%)
Ppef2	XP_038947795.1	IQCD	<60..81	CDD:467745	12/20 (60%)
		MPP_RdgC	161..577	CDD:277364	165/418 (39%)
		FRQ1	617..762	CDD:444056	60/145 (41%)
		EFh	697..762	CDD:238008	29/64 (45%)