DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgC and dis2

DIOPT Version :10

Sequence 1:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_596317.1 Gene:dis2 / 2541193 PomBaseID:SPBC776.02C Length:327 Species:Schizosaccharomyces pombe


Alignment Length:331 Identity:108/331 - (32%)
Similarity:170/331 - (51%) Gaps:33/331 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 IDLLIDVFRKKRGNRLHP-KYVALI---LREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDD 250
            :|.:||...:.||:|  | :.|.|.   :|......:::....|:...:...:.:|||:||:..|
pombe     8 LDSIIDRLLEVRGSR--PGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYD 70

  Fly   251 LLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYG 315
            ||.:....|.|..:| |:|.||:|||||:.|||:.|||:..:.:|...|:.|||||.:.:|..||
pombe    71 LLRLFEYGGFPPEAN-YLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYG 134

  Fly   316 FIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSI 379
            |..|.:.:|  |.|....|.| .:..||:.::::.::..:|||.| |..|:|.|:.|.|      
pombe   135 FYDECKRRY--NIKLWKTFTD-CFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMR------ 190

  Fly   380 LRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRS 444
                     |.|..:...:.|::||||...:....:..||....|||||...||.:|.:..|.|:
pombe   191 ---------PTDVPDTGLLCDLLWSDPDKDLTGWGDNDRGVSFTFGPDVVSRFLHKHDMDLVCRA 246

  Fly   445 HECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQTKRLSFKQRM 509
            |:...:|:||....:::|:|||.||.....|.||.:.::..|:..| |.:..|.:      |||.
pombe   247 HQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSF-QILKPAEK------KQRY 304

  Fly   510 GIVESS 515
            |...||
pombe   305 GYQGSS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgCNP_536738.3 IQ 89..111 CDD:197470
MPP_RdgC 184..494 CDD:277364 101/308 (33%)
FRQ1 527..681 CDD:444056
EFh 616..681 CDD:238008
dis2NP_596317.1 MPP_PP1_PPKL 7..297 CDD:277359 101/310 (33%)
Blue background indicates that the domain is not in the aligned region.

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