Protein Alignment rdgC and pph3

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_596646.1
• Gene: pph3 / 2540680
• PomBaseID: SPBC26H8.05C
• Length: 348
• Species: Schizosaccharomyces pombe
• Alignment Length: 325
• Identity: 98/325 - (30%)
• Similarity: 152/325 - (46%)
• Gaps: 78/325 - (24%)

  Fly   234 VSQQVTVCGDLHGKLDDLLVVLHKNG-LPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNA 297
            :|..||:|||:||:|.|||.:....| .|.:.  |:|.|||||||...:|..||||:|...:|..
pombe    44 ISSPVTICGDIHGQLHDLLELFRIGGSCPGTK--YLFLGDFVDRGFYSVETFLLLLTLKCKYPKE 106

  Fly   298 VFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS 362
            :.|.|||||...:...|||..|...||  ....:..:..|::.:|.||::::.:|..||||.|.|
pombe   107 MTLIRGNHESRQITQVYGFYDECVRKY--GSANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPS 169

  Fly   363 -TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQ--ATMGCVPNTLRGAGVWF 424
             :|:|.|:.:||.:.|.      .:|         .:.|::||||:  :..|..|   ||||..|
pombe   170 ISSIDQIRLLDRKQEVP------HEG---------AMCDLLWSDPEDISGWGLSP---RGAGFLF 216

  Fly   425 GPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNK------------------------------ 459
            |.||::.|.:.:.||::.|:|:....|::....:|
pombe   217 GADVSEVFNRANDLSFIARAHQLVMEGYKIHFSDKDKQYPKFTNEEDSELDSDSASPVDDSPAPG 281

  Fly   460 ------------IITIFSASNY-YAIGSNKGAYIRLNNQLMPHFVQYISAASQTKRLSFKQRMGI 511
                        ::|::||.|| |..| |..:.::|:......| :....|||       :|.||
pombe   282 DIITIPEKDKGSVVTVWSAPNYCYRCG-NVASILQLDENQTQSF-KIFGTASQ-------ERSGI 337

  Fly   512  511
            pombe   338  337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	92/306 (30%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
pph3	NP_596646.1	MPP_PP2A_PP4_PP6	5..330	CDD:277360	92/309 (30%)