Protein Alignment rdgC and Ppp2cb

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_058736.1
• Gene: Ppp2cb / 24673
• RGDID: 3381
• Length: 309
• Species: Rattus norvegicus
• Alignment Length: 294
• Identity: 94/294 - (31%)
• Similarity: 157/294 - (53%)
• Gaps: 30/294 - (10%)

  Fly   204 RLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYV 268
            :|:...|..:..:|.:.|.:..|:..|..    .||||||:||:..||:.:....|....:| |:
  Rat    22 QLNENQVRTLCEKAKEILTKESNVQEVRC----PVTVCGDVHGQFHDLMELFRIGGKSPDTN-YL 81

  Fly   269 FNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILA 333
            |.||:||||...:|.:.||::|.:.:|..:.:.|||||...:...|||..|...||  .:..:..
  Rat    82 FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKY--GNANVWK 144

  Fly   334 FIDEVYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQ 397
            :..:::.:|||.::::.::..:|||.|.| .:||.|:::||.:.|....|
  Rat   145 YFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGP--------------- 194

  Fly   398 IFDIMWSDP--QATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKI 460
            :.|::||||  :...|..|   ||||..||.|:::.|...:.|:.|.|:|:....|:.:.||..:
  Rat   195 MCDLLWSDPDDRGGWGISP---RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNV 256

  Fly   461 ITIFSASNY-YAIGSNKGAYIRLNNQLMPHFVQY 493
            :|||||.|| |..| |:.|.:.|::.|...|:|:
  Rat   257 VTIFSAPNYCYRCG-NQAAIMELDDTLKYSFLQF 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	94/294 (32%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
Ppp2cb	NP_058736.1	MPP_PP2A_PP4_PP6	9..293	CDD:277360	94/294 (32%)