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Protein Alignment rdgC and Ppp5c

DIOPT Version :9

Sequence 1:	NP_536738.3	Gene:	rdgC / 40224	FlyBaseID:	FBgn0265959	Length:	746	Species:	Drosophila melanogaster
Sequence 2:	NP_035285.2	Gene:	Ppp5c / 19060	MGIID:	102666	Length:	499	Species:	Mus musculus

Alignment Length:	424	Identity:	145/424 - (34%)
Similarity:	218/424 - (51%)	Gaps:	68/424 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    96 FIQKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKFFNDLIKHMPQAAGRKNQYQ----- 155
            :|:.:|||..:...:.:      |:    |:.:|       :..::|..|.....|.:||
Mouse    95 YIKGYYRRAASNMALGK------FR----AALRD-------YETVVKVKPNDKDAKMKYQECSKI 142

  Fly   156 -----------GSAH-VSVLDDKD----DLVEEFG--DIVNAKIELPIRKNHIDLLIDVFRKKRG 202
                       |..| .||:|..|    .:.:|:.  .:.:.|:.:...|:    |:..::.::
Mouse   143 VKQKAFERAIAGDEHRRSVVDSLDIESMTIEDEYSGPKLEDGKVTITFMKD----LMQWYKDQK- 202

  Fly   203 NRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPY 267
             :||.|....||.:..:.|.:|..:...:...::::|||||.||:..|||.:...|||||.:|||
Mouse   203 -KLHRKCAYQILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 266

  Fly   268 VFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRIL 332
            :|||||||||...:||:|.|....|.:|:...|.|||||...||..|||..||::||.   .::.
Mouse   267 IFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT---AQMY 328

  Fly   333 AFIDEVYRWLPLGSVLNSRVLIVHGG-FS-DSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEW 395
            ....||:.||||...:|.:|||:||| || |..:||.|:.|:|.:     :||  |..|:
Mouse   329 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNR-----QPP--DSGPM----- 381

  Fly   396 QQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKI 460
               .|::|||||...|...:. ||....||||||..||:.::|.|:|||||.|..|:|..|..:.
Mouse   382 ---CDLLWSDPQPQNGRSVSK-RGVSCQFGPDVTKAFLEENQLDYIIRSHEVKAEGYEVAHGGRC 442

  Fly   461 ITIFSASNYYAIGSNKGAYIRL-NNQLMPHFVQY 493
            :|:|||.||.....||.:||.| .:.|.|.|.|:
Mouse   443 VTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQF 476

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.