Protein Alignment rdgC and R08A2.2

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_506632.2
• Gene: R08A2.2 / 187692
• WormBaseID: WBGene00011133
• Length: 371
• Species: Caenorhabditis elegans
• Alignment Length: 327
• Identity: 106/327 - (32%)
• Similarity: 155/327 - (47%)
• Gaps: 46/327 - (14%)

  Fly   166 KDDLVEEFGDIVNAKIELPIRKNHIDLLI-----DVFRKKRGNRLHPKYVALILREAAKSLKQLP 225
            |.||.|  |:.|:     .:.|..|:.|:     |.|..|:        :..||.:|..:|..|
 Worm     7 KGDLYE--GESVD-----QLAKRMIEHLLKWGVTDAFNDKQ--------IYTILEKAESTLNPL- 55

  Fly   226 NISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSL 290
               |....|...:|:.||:||:||.|:......|.|.... ::|.||:||||.:..||.|||...
 Worm    56 ---PAMLQVEHPITIVGDIHGQLDALIRYFDAVGYPPKVK-FLFLGDYVDRGAKSFEVSLLLFCY 116

  Fly   291 YLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIV 355
            .:.:|::|.|.|||||...||..|||..|:..|   ...|:......|:..|||.:.:..|:|.:
 Worm   117 KIRYPHSVHLLRGNHECMKMNRLYGFYEELARK---RGGRMWRQYQNVFNELPLCARVGQRILCM 178

  Fly   356 HGGFSDS-TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGC---VPNT 416
            |||.|.: .|.:..|:         |:.|.|   ||...|..|: |:||:||.... |   ..|.
 Worm   179 HGGISQNCNSWESFKA---------LKKPNT---PLTCDEGLQV-DLMWADPTQDK-CNTFAMNK 229

  Fly   417 LRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIR 481
            .|...|.||....|.||::..||.::|:||....|..|:.:.|.:|:|||..|....:|.||.:.
 Worm   230 QRAISVVFGEKGLDVFLKKLGLSLIVRAHEVSQEGFNFLFNKKCVTVFSAPYYCGNDTNCGAIMH 294

  Fly   482 LN 483
            ::
 Worm   295 VS 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	100/309 (32%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
R08A2.2	NP_506632.2	PP2Ac	36..308	CDD:197547	96/291 (33%)