Protein Alignment rdgC and let-92

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001369970.1
• Gene: let-92 / 178117
• WormBaseID: WBGene00002363
• Length: 318
• Species: Caenorhabditis elegans
• Alignment Length: 337
• Identity: 100/337 - (29%)
• Similarity: 168/337 - (49%)
• Gaps: 56/337 - (16%)

  Fly   161 SVLDDKDDLVEEFGDIVNAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLP 225
            :::.|.|..:|:   :...|   |:.:|.:..|.:                    :|.:.|::.|
 Worm    14 ALIVDVDQWIEQ---LYECK---PLSENQVKTLCE--------------------KAKEILEKEP 52

  Fly   226 NISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSL 290
            |:..|..    .||||||:||:..||: .|.|.|..|....|:|.||:||||...:|.:.||:.|
 Worm    53 NVQEVRC----PVTVCGDVHGQFHDLM-ELFKMGGKSPDTNYLFMGDYVDRGYYSVETVSLLVCL 112

  Fly   291 YLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIV 355
            .:.:.:.|.|.|||||...:...|||..|...||  .:..:..:..:::...||.::::.::..:
 Worm   113 KIRYKDRVTLLRGNHESRQITQVYGFYDECLRKY--GNSNVWKYFTDLFDCFPLTALVDGQIFCL 175

  Fly   356 HGGFSDS-TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDP--QATMGCVPNTL 417
            |||.|.| .:||.|:::||.:.|....|               :.|::||||  :...|..|
 Worm   176 HGGLSPSIDTLDHIRALDRIQEVPHEGP---------------MCDLLWSDPDDRGGWGISP--- 222

  Fly   418 RGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNY-YAIGSNKGAYIR 481
            ||||..||.|:::.|...:.|:.:.|:|:....|:.:.||..::|:|||.|| |..| |:.|.:.
 Worm   223 RGAGYTFGQDISETFNHSNGLTLISRAHQLVMEGYNWSHDRNVVTVFSAPNYCYRCG-NQAAMVE 286

  Fly   482 LNNQLMPHFVQY 493
            |::.|...|:|:
 Worm   287 LDDDLKYSFLQF 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	96/314 (31%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
let-92	NP_001369970.1	MPP_PP2A_PP4_PP6	18..302	CDD:277360	100/333 (30%)