Protein Alignment rdgC and R08C7.8

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_500563.2
• Gene: R08C7.8 / 177208
• WormBaseID: WBGene00019951
• Length: 362
• Species: Caenorhabditis elegans
• Alignment Length: 281
• Identity: 96/281 - (34%)
• Similarity: 140/281 - (49%)
• Gaps: 26/281 - (9%)

  Fly   208 KYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGD 272
            |.:..||.:|..:||.|    |....|...:|:.||:||:||.|:......|.|.... ::|.||
 Worm    30 KQIYTILEKAESTLKPL----PAMLQVEHPITIVGDIHGQLDALIRYFDAVGYPPKVQ-FLFLGD 89

  Fly   273 FVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDE 337
            :||||.:..||.|||....:.:|:.|.|.|||||...||..|||..|:..|   ...|:......
 Worm    90 YVDRGAKSFEVSLLLFCYKIRYPHLVHLLRGNHECMKMNRLYGFYEELTRK---RGGRMWRQYQN 151

  Fly   338 VYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDI 401
            |:..|||.:.:..|:|.:|||.|.: .|.:..|:         |:.|.|   ||...|..|: |:
 Worm   152 VFNELPLCARVGQRILCMHGGISQNCNSWESFKA---------LKKPNT---PLTCDEGLQV-DL 203

  Fly   402 MWSDPQATMGC---VPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITI 463
            ||:||.... |   ..|..|...|.||....|:||::..||.::|:||....|..|:.:.|.:|:
 Worm   204 MWADPTQDK-CNTFAMNKQRAISVVFGQKGLDDFLKKLGLSLIVRAHEVSQEGFNFLFNKKCVTV 267

  Fly   464 FSASNYYAIGSNKGAYIRLNN 484
            |||..|....:|.||.:.:::
 Worm   268 FSAPYYCGNDTNCGAIMHVSD 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	96/281 (34%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
R08C7.8	NP_500563.2	PP2Ac	27..299	CDD:197547	96/281 (34%)