Protein Alignment rdgC and pph-4.2

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001022898.1
• Gene: pph-4.2 / 176663
• WormBaseID: WBGene00004086
• Length: 321
• Species: Caenorhabditis elegans
• Alignment Length: 328
• Identity: 95/328 - (28%)
• Similarity: 159/328 - (48%)
• Gaps: 36/328 - (10%)

  Fly   188 NHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLL 252
            |.:|..|::  ..|...:....|..|..:..:.|.:..|:..:.|    .||:|||:||:..||:
 Worm    15 NDLDRQIEI--AMRCELICETQVKSICAKVREILIEEANVQVIDT----PVTICGDIHGQFHDLM 73

  Fly   253 VVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFI 317
            .:....|.|.::| |:|.||:||||...:|..:||:.|...:|:.:.|.|||||...:...|||.
 Worm    74 ELFRVGGSPPNTN-YLFLGDYVDRGYNSVETFILLMLLKCRYPDRITLIRGNHESRQITQVYGFY 137

  Fly   318 REVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSIDRGKYVSILR 381
            .|...||  ...::.....|::.:|.|.:|::.::..||||.|.| .:||.|:.:||...|....
 Worm   138 DECVRKY--GSGQVWKHCTEIFDYLSLAAVIDGKLFCVHGGLSPSIATLDQIRVLDRKIEVPHEG 200

  Fly   382 PPLTDGEPLDKTEWQQIFDIMWSDPQ---ATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIR 443
            |               :.|::||||:   :..|..|   ||||..||.|..:.|.:.:....:.|
 Worm   201 P---------------MCDLLWSDPEEGCSGWGISP---RGAGYLFGGDAAELFCENNDFLRICR 247

  Fly   444 SHECKPNGHEFMHDNKIITIFSASNY-YAIGSNKGAYIRLNNQLM---PHFVQYISAASQTKRLS 504
            :|:....|::.....:::|::||.|| |..| |..|.:.:..:.:   |.|..:.:|..:.:...
 Worm   248 AHQLVMEGYKLHFRKRVVTVWSAPNYCYRCG-NVAAIMEVTEENIDSDPVFEVFEAATVENRGEP 311

  Fly   505 FKQ 507
            .||
 Worm   312 KKQ 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	92/313 (29%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
pph-4.2	NP_001022898.1	MPP_PP2A_PP4_PP6	16..303	CDD:277360	91/314 (29%)