Protein Alignment rdgC and R13A5.11

DIOPT Version :9

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001299879.1
• Gene: R13A5.11 / 176075
• WormBaseID: WBGene00020053
• Length: 459
• Species: Caenorhabditis elegans
• Alignment Length: 522
• Identity: 127/522 - (24%)
• Similarity: 220/522 - (42%)
• Gaps: 111/522 - (21%)

  Fly     9 RTDDDGKRRSSSVEDA----SSCRSSEIERVGASMQTLGPNGQPQSSAAQTSTRASSLLQLFQRR 69
            ||....:..||.||.|    |..||.:.:||.|    :.|..:      |...::..|.:..:|.
 Worm     6 RTPVSSRATSSGVETAHEARSKARSGKKDRVVA----MSPMNR------QRKNKSHVLNEKDERP 60

  Fly    70 GWCKHFRKPLRGM--------------------SASRAEKTIRAAIFIQKWYRRHQARREMQRRC 114
            |.....:..:|.|                    :.|:....|:||:.||....:..|:...:|:
 Worm    61 GGIIKEKSSVRSMAKTQPPSGRTISLTEINKPNALSKKNTEIKAAVEIQNRLTKKMAKNSERRK- 124

  Fly   115 NWQIFQNLEYASEQDQAELYKFFNDLIKH--MPQAAGRKNQYQGSAHVSVLDDKDDLVEEFGDIV 177
              |:....|..::....|...|.:.|.:|  :.||...|.||              ..|||.:::
 Worm   125 --QMAHGPEMTAQNRTQERIDFVDFLDRHYQVIQAGVHKIQY--------------TKEEFENVI 173

  Fly   178 NAKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCG 242
                                           |.|   :....|.|.|.:|.|       ...|.|
 Worm   174 -------------------------------YEA---QTIFSSEKALVDIDP-------PCVVVG 197

  Fly   243 DLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHED 307
            ||||:.:||:.:....|.|..: .|||.||:||||...||.::||.:..:.:|..:.|.|||||.
 Worm   198 DLHGQFNDLINMFILLGRPPET-VYVFTGDYVDRGMMSLECIMLLFTYKICYPENIVLLRGNHEI 261

  Fly   308 SVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSI 371
            :.:|.:|||..|..:..|:..:.|.|.....:..||:.:::.:::|.:|||.|.: |.||.:::
 Worm   262 ARVNKKYGFYEECVTSIPKCGEEIWALFQRCFNNLPISALIATKILCMHGGLSPALTCLDELRN- 325

  Fly   372 DRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRH 436
                :...:|.|...          .:.|::|:||..::.....:.||:|..||.:|.|:..:|.
 Worm   326 ----HPKPIRNPFRG----------IVNDMLWADPDPSVFEWKASSRGSGFTFGTNVIDDVCKRL 376

  Fly   437 RLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQTK 501
            .:..:||:|:...:|:..:...|:||||||..|.....|.|..::::..|....:.::.|:...:
 Worm   377 GVELIIRAHQMCFDGYWVLSGRKLITIFSAPMYCNFYKNAGCVLKVDETLGIQMIAFVPASENIE 441

  Fly   502 RL 503
            ::
 Worm   442 KI 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470	6/21 (29%)
		MPP_RdgC	184..494	CDD:277364	84/310 (27%)
		EFh	616..681	CDD:238008
R13A5.11	NP_001299879.1	PP2Ac	164..437	CDD:197547	88/343 (26%)
		MPP_PPP_family	194..422	CDD:277316	76/243 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910