Sequence 1: | NP_536738.3 | Gene: | rdgC / 40224 | FlyBaseID: | FBgn0265959 | Length: | 746 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491429.1 | Gene: | gsp-3 / 172082 | WormBaseID: | WBGene00021113 | Length: | 305 | Species: | Caenorhabditis elegans |
Alignment Length: | 271 | Identity: | 88/271 - (32%) |
---|---|---|---|
Similarity: | 137/271 - (50%) | Gaps: | 21/271 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 234 VSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAV 298
Fly 299 FLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS- 362
Fly 363 TSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDP-QATMGCVPNTLRGAGVWFGP 426
Fly 427 DVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFV 491
Fly 492 QYISAASQTKR 502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgC | NP_536738.3 | IQ | 89..111 | CDD:197470 | |
MPP_RdgC | 184..494 | CDD:277364 | 86/261 (33%) | ||
EFh | 616..681 | CDD:238008 | |||
gsp-3 | NP_491429.1 | MPP_superfamily | 6..297 | CDD:301300 | 87/262 (33%) |
PP2Ac | 29..299 | CDD:197547 | 87/264 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000018 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |