Protein Alignment rdgC and Ppp4c

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_599186.2
• Gene: Ppp4c / 171366
• RGDID: 621225
• Length: 307
• Species: Rattus norvegicus
• Alignment Length: 319
• Identity: 100/319 - (31%)
• Similarity: 163/319 - (51%)
• Gaps: 26/319 - (8%)

  Fly   191 DLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVL 255
            ||...:.:.:|...:....|..:..:|.:.|.:..|:.    .|...||||||:||:..||..:.
  Rat     6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQ----RVDSPVTVCGDIHGQFYDLKELF 66

  Fly   256 HKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREV 320
            ...|....:| |:|.|||||||...:|..||||:|.:.:|:.:.|.|||||...:...|||..|.
  Rat    67 RVGGDVPETN-YLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDEC 130

  Fly   321 ESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDS-TSLDLIKSIDRGKYVSILRPPL 384
            ..||  ....:..:..|::.:|.|.::::.::..||||.|.| .:||.|::|||.:.|.
  Rat   131 LRKY--GSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVP------ 187

  Fly   385 TDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKP 449
            .||         .:.|::||||:.|.|...:. ||||..||.||...|...:.:..:.|:|:...
  Rat   188 HDG---------PMCDLLWSDPEDTTGWGVSP-RGAGYLFGSDVVAQFNAANDIDMICRAHQLVM 242

  Fly   450 NGHEFMHDNKIITIFSASNY-YAIGSNKGAYIRLNNQLMPHFVQYISAASQTKRLSFKQ 507
            .|:::..:..::|::||.|| |..| |..|.:.|:..|...|:.:.:|..:|:.:..|:
  Rat   243 EGYKWHFNETVLTVWSAPNYCYRCG-NVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	97/304 (32%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
Ppp4c	NP_599186.2	None