Protein Alignment rdgC and Ppp6c

DIOPT Version :10

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_598273.2
• Gene: Ppp6c / 171121
• RGDID: 708460
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 296
• Identity: 99/296 - (33%)
• Similarity: 145/296 - (48%)
• Gaps: 65/296 - (21%)

  Fly   208 KYVALILREAAKSLKQLP-------------------NISPVSTAVSQQVTVCGDLHGKLDDLLV 253
            |||     |.|:..|.||                   |:.||||    .||||||:||:..||..
  Rat     8 KYV-----EIARQCKYLPENDLKRLCDYVCDLLLEESNVQPVST----PVTVCGDIHGQFYDLCE 63

  Fly   254 VLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIR 318
            :....|....:| |:|.|||||||...||....||:|...:|:.:.|.|||||...:...|||..
  Rat    64 LFRTGGQVPDTN-YIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYD 127

  Fly   319 EVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDRGKYVSILRP 382
            |.::||  .:.....:..:|:..|.:.::::.::|.||||.| |..:||.|::|:|.
  Rat   128 ECQTKY--GNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERN-------- 182

  Fly   383 PLTDGEPLDKTEWQQI------FDIMWSDPQ--ATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLS 439
                         |:|      .|::||||:  .|....|   ||||..||..||:.|:..:.|.
  Rat   183 -------------QEIPHKGAFCDLVWSDPEDVDTWAISP---RGAGWLFGAKVTNEFVHINNLK 231

  Fly   440 YVIRSHECKPNGHEFMHDNKIITIFSASNY-YAIGS 474
            .:.|:|:....|::||.|.|::|::||.|| |..|:
  Rat   232 LICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGN 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	99/296 (33%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008
Ppp6c	NP_598273.2	MPP_PP2A_PP4_PP6	5..289	CDD:277360	99/296 (33%)