Sequence 1: | NP_536738.3 | Gene: | rdgC / 40224 | FlyBaseID: | FBgn0265959 | Length: | 746 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003200844.5 | Gene: | ppef2b / 100537436 | ZFINID: | ZDB-GENE-160512-1 | Length: | 509 | Species: | Danio rerio |
Alignment Length: | 478 | Identity: | 181/478 - (37%) |
---|---|---|---|
Similarity: | 255/478 - (53%) | Gaps: | 103/478 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 RGMSASRAEKTIRAAIFIQKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKFFNDLIKHM 144
Fly 145 PQAAGRKNQYQGSAHVSVLDDKDDLVEEFGDIVNAKIELPIRKN----HIDL------------- 192
Fly 193 -------LIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDD 250
Fly 251 LLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYG 315
Fly 316 FIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDSTSLDLIKSIDRGKYVSIL 380
Fly 381 RP------------------------PLTDGEPL------------------------------- 390
Fly 391 -----------DKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRS 444
Fly 445 HECKPNGHEFMHDNKIITIFSAS 467 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdgC | NP_536738.3 | IQ | 89..111 | CDD:197470 | 11/21 (52%) |
MPP_RdgC | 184..494 | CDD:277364 | 143/374 (38%) | ||
EFh | 616..681 | CDD:238008 | |||
ppef2b | XP_003200844.5 | MPP_superfamily | 135..475 | CDD:326311 | 137/341 (40%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D215218at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |