Protein Alignment rdgC and ppef2

DIOPT Version :9

• Sequence 1: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: XP_031760727.1
• Gene: ppef2 / 100496073
• XenbaseID: XB-GENE-956418
• Length: 781
• Species: Xenopus tropicalis
• Alignment Length: 738
• Identity: 277/738 - (37%)
• Similarity: 399/738 - (54%)
• Gaps: 127/738 - (17%)

  Fly    80 RGMSASRAEKTIRAAIFIQKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKFFNDLIKHM 144
            :|.:...|....::|:.||:||||:.|:.|::|||.|.|||::||..||||.:||.|||.|:.|.
 Frog    49 QGSTLVPAGTAFKSAVLIQRWYRRYIAQMEVRRRCTWSIFQSIEYTGEQDQIKLYDFFNLLMDHF 113

  Fly   145 PQAAGRKNQYQGSAHVSVLDDKDDLVEEFGDIVNAKI---------ELPIRKNHIDLLIDVFRKK 200
            .....::..:.........:.||..:|::.|....::         ..||:..|...|::.|  |
 Frog   114 TPDNSKERDFICRIFTEEENFKDTELEKYCDYETIEVPESYTGPHLSFPIKPTHATALVEAF--K 176

  Fly   201 RGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSN 265
            :..:||.:||..:|.|..|.|||||||..:||:..:::|:||||||:||||.::.:||||||...
 Frog   177 QNQQLHSRYVLHLLHETKKYLKQLPNIKRISTSYGKEITICGDLHGRLDDLFLIFYKNGLPSPEK 241

  Fly   266 PYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKR 330
            ||:||||||||||:.:|:|::|.:..|.:|..|.||||||||.::|.||||.:||..||..:.|:
 Frog   242 PYIFNGDFVDRGKQSIEILMILFAFQLVYPKVVHLNRGNHEDYIVNLRYGFTKEVMKKYKVHGKK 306

  Fly   331 ILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDSTSLDLIKSIDRGKYVSILRP------------- 382
            ||..:..|:.||||.::::.:||:.|||.||:|.|:::..|:|.|:.|.|||
 Frog   307 ILKMLQSVFSWLPLATLIDQKVLVTHGGVSDTTDLEILSKIERHKFASTLRPHKKKEKNKQIGIQ 371

  Fly   383 -----------------------------------------------PLT--------------- 385
                                                           |.|
 Frog   372 PSEGKCPNDNKSHNLVATWPSPRSGSFSYSPSPHLIPAYKGKRSASSPTTMTIDRKAISKRVRKS 436

  Fly   386 ---------------------DGE----------------PLDKTEWQQIFDIMWSDPQATMGCV 413
                                 ||.                .:|..|.:||.||:||||....||.
 Frog   437 VDEELEKCRRQVGFNQTYVEPDGSASVSESDSESGEMHECDIDDEEKKQIVDILWSDPIPQDGCK 501

  Fly   414 PNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGA 478
            .||:||.|.:||||||:..||:|.|..:|||||||..|:||.|..|::|||||||||.:||||||
 Frog   502 SNTVRGGGCYFGPDVTEKILQKHGLQMLIRSHECKQEGYEFCHSGKVLTIFSASNYYEVGSNKGA 566

  Fly   479 YIRLNNQLMPHFVQYISAASQTKRLSFKQRMGIVESSALKELAVRMRDHRDELEDEFRKYDPKDS 543
            :::|...|:|||||| .|:..|..|:.:||:..||.|||:.|..::..|:.:|.:.||.||...:
 Frog   567 FVKLGPDLVPHFVQY-QASRLTNNLTLRQRVSTVEESALRALREKLFAHKSDLMNAFRNYDNNQT 630

  Fly   544 GYISISHWCKVMENVTKLGLPWRLLRDKLAPGTDSQKVNYNRTLDLLDT-DVILEAEADGMSVMD 607
            |||::|.|..|:|:|..||||||:||.:|...:....:.|....|.|.. ..|.|...|  |:::
 Frog   631 GYINLSDWAIVLESVLNLGLPWRMLRPQLIHSSPEGLLRYREWFDELSVCQPIQEHLHD--SLLE 693

  Fly   608 ALYANKASLVAIFNIIDADNSGEITLDEFETAIDLLVAHMPGAYSKAEMLEKCRMMDLNGDGKVD 672
            |||.|::.|..||.|||:|:||.|:.:||:....||.:|:....|...:.:..|.:|.|.||.:|
 Frog   694 ALYRNRSDLETIFRIIDSDSSGLISFEEFQHTWKLLSSHLNIEVSDEAICKMARSIDFNKDGNID 758

  Fly   673 LNEFLEAFRLSDLHRKEQQDENI 695
            :|||||||||.|....|.::..:
 Frog   759 INEFLEAFRLVDKPNIEDKESEM 781

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rdgC	NP_536738.3	IQ	89..111	CDD:197470	9/21 (43%)
		MPP_RdgC	184..494	CDD:277364	163/421 (39%)
		EFh	616..681	CDD:238008	28/64 (44%)
ppef2	XP_031760727.1	MPP_superfamily	162..582	CDD:417454	164/422 (39%)
		PTZ00183	615..763	CDD:185503	57/149 (38%)
		EFh	701..767	CDD:238008	28/65 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	83	1.000	Domainoid score	I8216
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H55959
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D215218at33208
OrthoFinder	1	1.000	-	-		FOG0000018
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.010