DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clc and AgaP_AGAP010608

DIOPT Version :9

Sequence 1:NP_001163480.1 Gene:Clc / 40221 FlyBaseID:FBgn0024814 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_558141.3 Gene:AgaP_AGAP010608 / 1275332 VectorBaseID:AGAP010608 Length:219 Species:Anopheles gambiae


Alignment Length:225 Identity:121/225 - (53%)
Similarity:144/225 - (64%) Gaps:21/225 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASEGDLLSA 67
            |||:|..:.:||||||||||||:||..||.||       ||.|:   |.|....|:.:...:..|
Mosquito     4 FGDNFEQQSEVDPAAEFLAREQNALAGLEDEI-------PPVAA---GAGTSANGSVNGDPVPKA 58

  Fly    68 GGTGGLESSTGS---FEVIGGESNEPVGISG-------PPPSREEPEKIRKWREEQKQRLEEKDI 122
            |......:||.:   |..........:.||.       |....|||||||||||:||.||||||.
Mosquito    59 GACVDKAASTMNCVKFRPQHSTCYFDITISSFLSCPAVPKQVTEEPEKIRKWREDQKARLEEKDR 123

  Fly   123 EEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEWERIAKLCDF 187
            ||||||:|||:|::|||:||.:...|:|||||.|:||||||... |...||||||||||||||||
Mosquito   124 EEERKKDELREQARKELEDWYKHHEETISKTKSANRNAEKQFVA-ETDEIEPGTEWERIAKLCDF 187

  Fly   188 NPKVNKAGKDVSRMRSIYLHLKQNPIQVQK 217
            |||.||:.||:||||||.|.|||||:|..|
Mosquito   188 NPKTNKSNKDISRMRSIILQLKQNPLQATK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClcNP_001163480.1 Clathrin_lg_ch 6..212 CDD:279433 114/215 (53%)
AgaP_AGAP010608XP_558141.3 Clathrin_lg_ch 11..212 CDD:279433 113/211 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 205 1.000 Domainoid score I6228
eggNOG 1 0.900 - - E1_KOG4031
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1384
Inparanoid 1 1.050 217 1.000 Inparanoid score I5987
OMA 1 1.010 - - QHG46883
OrthoDB 1 1.010 - - D1577821at2759
OrthoFinder 1 1.000 - - FOG0002725
OrthoInspector 1 1.000 - - oto107145
Panther 1 1.100 - - LDO PTHR10639
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3012
TreeFam 1 0.960 - -
1312.940

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